KEGG   Semicossyphus pulcher (California sheephead): 138611352
Entry
138611352         CDS       T10596                                 
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1 isoform X1
  KO
K05635  laminin, gamma 1
Organism
spul  Semicossyphus pulcher (California sheephead)
Pathway
spul04510  Focal adhesion
spul04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:spul00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    138611352 (lamc1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    138611352 (lamc1)
SSDB
Motif
Pfam: Laminin_N EGF_laminin EGF_LMN_ATRN Laminin_B ATG17_like EGF_Teneurin DUF6061
Other DBs
NCBI-GeneID: 138611352
NCBI-ProteinID: XP_069540512
LinkDB
Position
Unknown
AA seq 1594 aa
MPSLIRALVALCWVAVCVRAAMDECSDEQGSPQRCMPEFVNAAFNVTVVATNTCGSPPEE
YCVQTGATGVTKSCHICDSRDSRNHHSAFYLTDYNNQQDTTWWQSQTMLAGIQYPNSINL
TLHLGKAFDITYVRLKFHTSRPESFAIYKRTSEGGPWVPYQYYSGSCEKTYQKASYGFIR
TGEDEQQALCTDDFSDISPLTGGNVAFSTLEGRPSAYNFDFSPVLQDWVTATDIRVTLNR
LNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECAKNNRGRLVCNCKHNTEGDD
CNVCKPFYNDRPWRRATADNSNECLPCDCNGKSSECYFDAELYRARGHGGHCRNCADNTD
GPNCERCLDNYYRDQSGSRCLPCSCNSVGSESPQCDNRGVCACKPGVTGEKCDRCQPGFH
SLTEAGCRPCSCSPSGSTQECDVNTGQCRCKDNVEGFSCDRCKLGYFNLDPNNPQGCTPC
FCFQHSSVCDSAEGYSVHTVSSSFNRDDEQWTAQQRDGSSVSVQWSPSGQEISLISDDYF
PMYFVAPEKFLGNQMLSYGQNLTLGFRVDRRDTRLSAEDLVLEGADLRVAVPLIAQGNAY
PNENMQTYVFRLHDSTDYPWRPTISHSDFQKLLHNLTAIKIRGTYSERSAGYLDDVSLVT
ARRGPGVPARWVERCTCPQGYQGQHCEQCTLGYRRASPELGAFSPCEPCNCNGHSEACDP
GSGACDCRDNTAGLSCERCKDGFYGDATRGTSGDCEPCPCPSGATCAVVFKTREVVCTNC
PVGTTGKRCELCDDGFFGDPLGQSGPVRACRACKCSDNIDPNAVGNCNRESGECLKCIYN
TDGFFCDRCKEGFYGNALASNTADKCKPCSCSPSGTVGRQTACSQVTGQCPCLPNVAERD
CSACQPGFFNLQSGNGCERCNCNPIGSTNGQCDIITGQCECQPGVTGLHCERCESNFFGF
SSSGCKPCDCDPEGSQSGQCKEDGRCECRPGFVGSRCDMCEENYFYNRSAPGCQQCPSCY
SLVRDKVNQQRQKLHDLQTLIDNLGSGQDTVSDKAFEDRMKEAERAIMELLEEAQTSKDV
DRGLLDRLNNINNTLTTQWNRLQNIRNTVDDTGTQADRARNRVRDAENLIDRARQELDKA
RDAVGKVDIKPPSGSGDPNNMTLLAEEARTLADKHKMDADQIEKIAKDANDTSTKAYNLL
LKTLDGEGKTSQEIEELNKKYNEAKELAKNLENQATKVQAEAEEAGDKALKIFANLTSIP
ALDTKALEDEAKKIKKEASDLDKLIDKTEKEYNDLRDDLKDKEQEVRKLLEKGKSEQQTA
DQLLARADAAKALAEEAAKKGQSTFREAESILDDLRDFDKRVNDNKTAAEDALKKIPPIS
AIIMAANEKTRQAEEALGNAANDAREAKTKAEEAERIASNVQKGSAKTKEDAEKAFQDTK
KLDEEVDDMMDQLTRAEKELAEKKAEADQDMMMAGMASDNAKEAEDNARKAKSAVKTVLS
TITALLDQLGNIDKVDLSKLNQIDESLKSARGKMANSELDRKLMELNDVARSQEDLINDY
DRQIREIRSDIANLNDIKNTLPDGCFNTPSLERP
NT seq 4785 nt   +upstreamnt  +downstreamnt
atgccgagtttgatccgggctctggtagctctgtgctgggtggcggtgtgtgtccgcgcg
gccatggacgagtgttcggacgagcagggctcaccgcagcgctgcatgcccgagttcgtt
aacgccgcttttaacgtaacggtggtagcgaccaacacctgcggctctccgcccgaggag
tactgcgtgcagaccggcgccaccggggtcaccaagtcctgccacatctgcgactcccgg
gactcccggaaccaccacagcgccttttacctgaccgactacaacaaccagcaggatacc
acctggtggcagagccagaccatgctcgcgggcatccagtacccgaactccatcaacctc
accctgcacctcggtaaggccttcgacatcacctacgtgcggctcaagttccacaccagc
cgccccgagagcttcgccatctacaagcgcaccagcgaggggggcccctgggtgccgtac
caatactacagcggctcctgcgagaagacgtaccagaaggcgagctacggcttcatccgc
accggggaggacgagcagcaggcgctctgcaccgacgacttcagcgacatctcgccgctc
accggtggaaacgtggccttctccacgctggaggggcgacccagcgcctacaacttcgac
ttcagccccgtcctccaggactgggtgaccgccaccgacatcagagtgaccctgaacagg
ctcaacacgttcggagacgaggttttcaacgatcccaaggtcctcaagtcctactactac
gccatctctgacttcgctgtgggaggaaggtgtaagtgtaacggccatgccagcgagtgt
gcgaagaacaacagaggacggctggtgtgtaactgcaaacacaacacggagggcgacgac
tgcaacgtctgcaaaccgttctacaacgaccggccgtggaggagagcgaccgccgacaac
tccaacgagtgtctgccctgcgactgtaacgggaagagctccgagtgttacttcgacgca
gagctgtaccgggcgaggggtcacggaggtcactgcagaaactgtgccgacaacaccgac
ggccccaactgtgagcgctgcctcgacaactactacagagatcagagcggcagccgctgc
ctgccctgcagctgcaactctgtcggctcagagtctcctcagtgtgacaacagaggggtg
tgtgcgtgtaaacccggagtgaccggagagaagtgtgaccgctgccagccggggttccac
agtctgaccgaggccggctgcaggccgtgctcttgctcgccctctggcagcactcaggag
tgtgacgtgaacactggacagtgtcgctgcaaagacaatgtggagggcttcagctgtgac
aggtgcaaactgggctacttcaacctggaccccaacaaccctcagggctgcacgccctgc
ttctgcttccagcactcgtctgtgtgcgacagcgccgagggctacagcgtccacaccgtc
agctcctccttcaatagagacgacgagcagtggaccgctcagcagcgtgacggctccagt
gtctccgtccagtggtctcccagcggacaggaaatctccctcatctcagacgactacttc
cccatgtacttcgtagccccagagaagttcttggggaaccagatgctgagttacggacag
aacctgactctgggtttccgggtcgaccgtcgggacactcggctgtcggcggaggatctg
gtcctggagggggcggacctgagggtggccgtcccccttatcgctcagggtaacgcctac
cccaacgagaacatgcagacctacgtgttcaggctccatgacagcactgattacccctgg
aggccgaccatcagccactcagacttccagaaacttctccacaacctgacggccatcaag
atccgtggcacctacagcgagaggagtgccgggtaccttgacgacgtctccttggtgacg
gcgaggcggggtccgggtgttccggcgcgctgggtagagagatgcacctgtcctcaggga
taccagggtcagcactgtgagcagtgcactctgggatatcgccgcgccagccccgagctc
ggcgccttcagcccctgtgagccctgcaactgtaacggccacagcgaggcctgcgacccc
ggctcaggagcgtgtgactgtcgggacaacacggccggtctgagctgtgagcgctgtaaa
gacggtttttatggcgacgccacgcgggggacgtcaggtgactgtgagccgtgtccgtgt
ccgtctggagcgacctgcgctgtcgtctttaagaccagagaggtggtgtgcaccaactgt
cctgtaggaaccacaggtaaacgctgcgagctctgcgacgacggtttcttcggcgacccg
ctgggtcagagcggcccggtccgagcctgccgcgcctgcaagtgtagtgacaacatcgac
cccaacgccgtcggaaactgcaaccgcgagagcggagagtgcctgaagtgcatctacaac
accgacggcttcttctgcgaccgctgcaaggagggtttctacggcaacgccctcgccagc
aacaccgccgacaagtgcaaaccctgctcctgttctccgtctggaaccgtgggccgtcag
acggcctgctctcaggtcaccggtcagtgtccgtgtctccctaacgtggccgagcgtgac
tgcagcgcctgccagcccggcttcttcaacctgcagagcggcaacggctgcgaacggtgt
aactgtaatcccattggctctaccaacggtcagtgtgacatcatcacaggtcagtgtgag
tgtcagcccggcgtcaccggcctgcactgcgagcgctgcgagagcaacttcttcggcttc
agctcgtccggatgcaaaccgtgtgactgtgaccctgagggctctcagtcgggtcagtgt
aaggaggacggtcgctgcgagtgtcggcccggcttcgtgggatctcgctgcgacatgtgt
gaggagaactacttctacaaccgctcggccccgggctgccagcagtgtccctcctgctac
agtctggtcagggacaaggtgaaccagcagaggcagaagctgcacgacctgcagactctg
atcgataacctgggctcgggtcaggacacggtcagcgataaggccttcgaggatcgcatg
aaggaggcagagagagccatcatggagctgctggaggaggctcagaccagcaaagatgtg
gacagaggcctgctggaccgtctgaacaacatcaacaacactctgaccacccagtggaac
cgtctgcagaacatccgcaacaccgtggacgacaccggcactcaggccgaccgcgcccgc
aaccgagtccgagacgccgagaacctgatcgaccgcgcccggcaggagctggacaaggcc
agggacgccgtcggcaaagtggacatcaaacccccgagcggcagcggagatccaaacaac
atgacgctgctggctgaggaggctcgcacgctggctgacaagcacaagatggacgccgat
cagatcgagaagattgccaaagacgccaacgacacatcgaccaaagcgtacaacctgctg
ctgaagactctggacggagagggcaagacgagtcaggagatcgaggagctcaacaagaag
tacaacgaggcgaaggagctggccaagaatctggagaatcaggccacgaaggttcaggcc
gaggccgaggaggccggagacaaagctctgaagatcttcgccaacctgaccagcatcccg
gcgctcgacacaaaggctctggaggatgaagccaaaaagatcaagaaggaggcgtcagac
ctcgacaagctgatcgataagacggagaaggagtacaacgacctgcgagacgacctgaag
gacaaagagcaggaagtgcgcaaactgctggagaaaggcaaaagcgagcagcagacggcc
gatcagctgttagctcgagccgacgctgccaaagctctggctgaggaggcggccaagaag
ggtcagtccaccttcagagaggctgagagcatcctggacgacctccgagacttcgacaag
cgagtcaacgacaacaagacggccgctgaggacgctttgaagaagatcccccccatcagc
gccatcatcatggccgccaacgagaagaccaggcaggcggaggaggcgctcggaaacgca
gccaacgacgcccgagaggccaagaccaaagcggaggaggcggagaggatcgccagcaac
gtgcagaagggctcggccaagaccaaggaggacgcagagaaggccttccaggacaccaaa
aagctggacgaggaggtggacgacatgatggaccagctgactcgtgctgagaaggagctg
gccgagaagaaggccgaggccgaccaggacatgatgatggcagggatggcgtcagataac
gcgaaggaggcagaggacaacgcccgcaaggccaagagcgcagtgaagactgttctgagc
accatcaccgccctgctggatcagctgggaaacatcgacaaggtggacctgagcaaactg
aaccagatcgatgagtccttgaagagcgccaggggcaagatggccaacagcgagctggac
aggaagctgatggagctgaacgacgtggcgcggtcccaggaggacttgatcaacgactat
gaccggcagatccgtgagatccgcagcgacatcgccaacctcaacgacatcaagaacacg
ttacctgacggctgcttcaacacgccgtccctggagaggccttaa

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