Semicossyphus pulcher (California sheephead): 138611587
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Entry
138611587 CDS
T10596
Symbol
chd8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
138611587 (chd8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spul03036
]
138611587 (chd8)
Chromosome and associated proteins [BR:
spul03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
138611587 (chd8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
HDA2-3
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
138611587
NCBI-ProteinID:
XP_069540866
LinkDB
All DBs
Position
Unknown
AA seq
2560 aa
AA seq
DB search
MADPIMDLFEDTPLFNLDALPDDSFTQGSSDPVEEALKLALGQVDPPAEPELTVNTSLNV
PVAAPAIPDPAPIQVPTQQPVPVVTAQTVSIAAAPAVASVPVDTVPQIQAQTTIPIASNT
SVAHSSTVLLSSPLTVSSPTITTTAATQQLTQITHQLTPQQLAAITQQAGGKIVILKGPQ
GQAQVLQTVSGAAGQTTGKVIRVLSGTPLKPGMSILQGGTVLNQASPGQAQVKVGAAGVQ
RLLQSPNGPVKQMLLTSQGQQVQVQIPAQAQIGQTQVQAQTAQIQVQTQGQVQLQPAMAA
QTQGGEAKRITLVLQQPSQAAVTAGQAVATQQQVTQVQQVQAGQQQQTPARLVLGQLPGG
KLVLQGSQLAALTQARAAGQAGGQPKVLTIQLQVQQQPNQQGGVKYQLVSGAGNAGSPQV
LQISQGQGGQRVAVPLKMLLQPQTSSVTTAGGTVSVVKVINTSSAGPSTTTTTPSQAIRI
TKAPGEPASVRRVEILCKQEKANRIVAEAIARAKARGEKNLPRVLNQDELPSTQTSPETG
GTVTIVTSAKKKSSGGGSKKKSPVAGATTPKSAGGADKKGKVKTPGGPTVAGGTVIPGAG
NKSKSKIKTNTITLVGAKKRKRNASSDHSDGEMSPASPAALEEDLITQRRSNRVVKRKKY
TEDLDIKITDDEDEQEDVDVTTTAAAVASISGGTAAQLKQEMELDVDGQPSMQFFVENPS
EEDAAIVDKVLSMRLTKKDVTQGQYTTVEEFFVKYKNYSYLHCEWASLEQLEKDKRIHQK
IKRFKTKHAQMRHLFQEEEEPFNPDYVEVDRILDVSHSVDKDNGEPVIYYLVKWCSLPYE
DATWELKEDVDEGKVEEFGKIANRQPRLKRTPRPAAASWKKLEETREYKNGNILREYQLE
GVNWLLFNWYNRQNCILADEMGLGKTIQSIALLSEVYSANIQGPFLVIAPLSTITNWERE
FSTWTDMNAIVYHGSLASRQMIQQYEMYCKDDKEHLIPGAYKFDALITTFEMILSDCPEL
REISWRCVIIDEAHRLKNRNCKLLDSLKMLDLEHKVLLTGTPLQNTVEELFSLLHFLEPA
QFPSETEFLRDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTDVQ
KKYYRAILERNFSFLSLGANSNSNVPNLLNTMMELRKCCNHPYLINGAEEKIVAELREVY
DPLASDFHLQALIRSAGKLVLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLINKRYLY
ERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCVIFDSDWNPQND
LQAQARCHRIGQSKAVKVYRLITRNSYEREMLDKASLKLGLDRAVLQSMSGNKDKDSVNG
IQQFSKKEIEDLLRKGAYAAIMDENDEGSRFCEEDIDQILQRRATTITIESEGKGSTFSK
ASFVASENRNDIALDDPEFWQKWAKKADIDMDTINRKNTLVIDTPRVRKQTRQYSSLRGE
GGDLSDLDSDDEYPPANSRQSRASRRSDRQSGGGYGRTDCFRVEKHLLVYGWGRWRDILS
HARCKRRLSERDVETICRVILVFCLLHYRGDENIKSFIWELITPPENGREPQTLLNHSGL
SIPVPRGRKGKRVKAQSTFDVQKVEWIRKYNPDTLLLDDSYRKHLKHQCNKVLLRVRMLY
YLKQEVIGEHSDSVLKGADIRDVDIWMPEMEQQEVPAGWWDGEADRSLLTGVFKHGYEMY
TTMRADPCLCFLERAGRPDDKAIDAEQHTGDAELGDDADYDKYSEDPEFKPASRHAKDLF
DEPDSMNVDDEISVEDKVGPVIVENVSSQSGACDWPSSSSLTARLRRLITAFQRSYRQEQ
LKIEAEAKGDRRRRRCEQASKLKEIARQERQQRWTRREECDFYRVVSTFGVEKIKKETGL
QEAGDPEFDWNRFRTFARLDKKTDESLSRYFRSFVAMCRRVCHLRPGRGEDPSEVSSAVA
PITEERASRTLYRISLLRRLRERVLPHTSLEERLPLAPTSSELPAWWNIPEHDRQLMLGA
ALHGVSRTELSIYSDPQFTFTQARDDFILNQQAPPPPPPPQAPPIIPLSTPKTEEDVPAV
KEEGAEEDGQLLGGQISAVLQSTPLSHHDGKAQGPGWSLKRSKIRVGKSGGRKGEGGSDS
DSDSDSGSSSSDRSGSSDDSGESEEETERAGMKLCDGDEENSLLSMTTSQDGIPPPDPLR
VDWPKDRVLINRLDSLCTLVASGQWPSGRRYVSEAQLNPSSELTGDEMTYTRLIRKPSSM
PGGPGAEGDDGEFTVKLLKEEGLKLTFSKQALMPNGSGGESSSRKKRKDQEFSDQDGLHD
PLERTPRRRDPPTWLKENPDYEVEGDMLELLVNRSKRKRRRRADKALTGSEKVKVINMRT
GKKVGAAFCPMLQDLREYLEENADNAVAPEWSDSVRNSGFLPETFFHRLLTEHSDIPKKS
RRRHHHHHHHHHTPEPTPEDPNLDGVEETEETLVSDGAYMMDEEDLETSHHFLTSPDFDV
KMEGGDSLSQGDYDSSDQEALLDDVIMAQKDSDSSSSSED
NT seq
7683 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccaatcatggacctctttgaggacacgcccctgttcaacctggacgcccta
ccggatgactccttcactcagggctcctcggaccctgtggaggaggcactgaagctggcc
ttgggccaagtggaccctccggccgagcccgagctcacggtcaacacgagccttaatgtt
cctgtagcagctcccgccatccctgaccctgcccccattcaagtccccacacagcagcca
gtgccagtggtgactgctcagactgtttccatagcagcagctcccgctgtagcctctgtc
cctgttgatactgtacctcagatccaggcccagaccaccatacccattgctagcaatacc
agcgtggcccacagtagcactgtcctgctgagttcacctctgactgtttccagccccacc
atcaccaccacggccgccacgcagcagctcacacagattacccaccagctcacccctcag
cagttagccgccatcacacagcaggctggagggaagattgtgattctcaaaggtccccag
ggtcaggcccaggtgctgcagactgtatcaggagctgcaggtcagaccactggaaaggtc
atccgtgtgctgtctggcactccgcttaaacccggcatgtccatactgcagggggggacg
gtcttgaatcaggcgagcccaggacaagctcaagtcaaggtgggtgctgcgggggtgcaa
aggctgcttcagtcccccaacggaccagtgaagcagatgctgcttacctcgcaaggccag
caggttcaggtgcagatcccagcccaagcacagattggccagactcaagtccaagcccag
actgcacagatccaggtccagactcagggtcaggtgcagcttcagccagccatggcggcc
caaacgcagggtggagaagcaaagcgcatcaccctggtgcttcagcagccctcccaggcc
gctgtgacagcaggtcaagctgttgcaacccagcaacaggtgactcaagttcagcaggtt
caggcaggccaacagcagcagaccccagctagactggtgctgggccagctccccggaggc
aaactggtgctccagggaagccagctcgcagccctgacccaggctcgggctgcaggccag
gcaggagggcagcccaaagtcctcacgattcagctgcaggtgcagcagcagcccaaccaa
caaggaggagttaagtaccagctggtgtcaggagctggaaacgccggcagcccacaggtg
ttgcagatctcacagggccaaggaggacagagagttgcggtgccactcaaaatgctcctg
cagccacagacaagctcagtaaccacggccggcggcacagtctctgtggtgaaggtcatc
aacacgtcgtctgcaggcccctccacaacaaccaccactccgtcccaggccatccgcatc
accaaggcgcccggcgagcctgcctccgtgcgacgagtggagatcctgtgcaagcaggag
aaagcaaaccgcatcgtggctgaagctatagcccgggccaaagcgcgcggcgagaagaac
ctgccccgagtcctgaaccaggacgagcttccatccacacagacctccccggaaacggga
ggcactgtcaccattgtgacatctgcaaagaagaagagcagcggagggggaagcaagaag
aaaagtcccgtagctggagcaacgacgcccaaatccgcaggaggggccgacaaaaagggc
aaagtaaagaccccgggaggaccaacagtggctggaggcacggtgataccaggagcaggg
aacaagagcaaaagcaagattaagacaaacactataactctagtgggagcaaagaagaga
aagaggaacgcgtcctccgatcactcagacggtgagatgagcccagcctcacctgctgca
ctggaggaggatctgattacgcagaggcgctccaatcgcgtggtgaagaggaagaagtac
acagaggacctggacatcaagataacagacgacgaggacgagcaggaagacgtagacgtt
actacgacggcggcggctgtggcctccatcagtggagggacagcagcgcagcttaaacag
gaaatggagctggatgtagatggacagcccagcatgcagttctttgtggaaaacccgagt
gaggaagatgctgccatcgtagacaaagttctctccatgaggttaacgaagaaggatgtg
acccagggccagtacaccactgtggaggagttctttgtcaaatacaaaaactattcgtac
ttacactgtgagtgggccagtttggagcagctggagaaagataagaggatccaccagaag
atcaagaggttcaagaccaaacatgcacagatgaggcacctcttccaggaggaggaggag
ccttttaaccccgactacgtagaggtggaccgcatcctggacgtttctcacagcgtcgac
aaggacaacggcgagcctgttatctactacttggtgaagtggtgctcgctgccttacgaa
gacgccacctgggagctgaaggaggacgtggacgagggcaaggttgaagaatttggcaaa
atcgcaaaccgacaacctcgcctgaagagaacgcctcggccggccgctgcgtcatggaag
aagctggaggagacgagagagtacaagaatggaaacatactccgcgagtatcagctggaa
ggagtcaactggctgctcttcaactggtacaacaggcagaactgtatcctcgcagacgag
atgggtttaggaaagaccatccagtccatcgcgctgctgtctgaggtttactccgctaac
atccaaggccccttcctggtcattgctccgctctccactatcactaactgggagagggag
ttctccacgtggaccgacatgaacgccatcgtctaccacggcagcctggccagcagacag
atgatccagcagtatgagatgtactgcaaggacgataaggagcacttgatcccaggtgcg
tacaagttcgacgccctcatcaccacctttgagatgatcttgtctgactgcccggagctg
agggagatctcctggcgctgtgtgatcatcgatgaagctcacagactcaagaatagaaac
tgcaagctgttggacagtttgaagatgctggatctggaacacaaggtgttgctgacgggc
actcctctccagaacacggtggaggaactcttcagcctgcttcacttcctggagcctgct
cagttcccctctgagactgaattcctccgagactttggagacctcaaaacagaggaacag
gttcaaaagctgcaggccatcttgaaaccgatgatgctacgaaggctcaaagaggatgtt
gagaagaacttggcacccaaacaggaaaccatcattgaggttgagttgacggatgtccag
aagaagtactaccgggccatcctggagaggaacttcagcttcctcagtttgggggcgaac
agtaacagcaacgtccccaacctgctcaacactatgatggagcttcgcaagtgctgcaac
cacccctacctcattaatggcgcagaggagaagatcgtagcggagttgcgggaggtgtat
gacccgctggcttccgacttccatttgcaggccctcattcggtcggccggcaagctggtg
ctgctggacaagctgctgcctcgcctgaaggctggcggccacaaagtgctcatcttctcc
cagatggtgcgctgcttagacattctggaggactacctcatcaacaagagatacctttat
gagcgaattgatggcagagttcgtgggaacttgcgacaggctgccatcgaccgcttcagc
aaacctgactcagaccgttttgtcttcctgctgtgtacccgcgccgggggcctgggtatc
aacctcactgctgccgacacatgtgtgatatttgactctgactggaaccctcaaaatgac
ctgcaggcacaagcacggtgtcatcgtatcggccagtctaaggcggtcaaggtctaccgt
ctgatcactaggaactcctacgagagggagatgctggataaagcaagtctgaagctcggc
ctggaccgtgctgtcctgcagagcatgagcggaaacaaagacaaagacagcgttaatgga
atccagcagttctccaagaaggagatcgaggacctgctgaggaaaggagcctacgctgcc
atcatggacgagaatgatgaaggcagccgcttctgcgaggaggacatcgaccagatcctt
cagcggagagcgaccaccatcactatcgagagcgaggggaagggctccacgttctccaag
gccagctttgtggcgtctgaaaaccgcaatgacatcgccctcgatgaccccgaattctgg
cagaagtgggccaagaaagccgacatagacatggacaccatcaacagaaagaacacactc
gtgatcgacactcctcgagtccgtaagcagacccgtcagtactccagtttacgaggtgaa
ggtggcgacctgtctgatctggacagcgacgacgagtatccacccgccaattccagacag
tcgcgtgcctcccgccgctccgaccgccaaagtggagggggttacggacgcactgactgt
ttccgggtagagaaacacctgcttgtctacggctggggtcgctggagggacatcttgtcc
cacgccagatgtaagcgtcgcctcagtgaacgcgacgttgagacgatctgtcgtgtcatc
ctggtcttctgtttgctccactatcggggagatgagaacatcaagagtttcatctgggag
ctcatcactccgccagagaacgggcgcgaaccccaaacactactcaaccactctggcctg
tccatccctgtcccgagaggcaggaagggtaagagggtaaaggctcagagcacgttcgat
gttcagaaggtggagtggatccgcaagtacaaccccgacacgctgctcctggacgacagc
taccgcaaacacctcaagcaccagtgcaacaaggtgttgctgagggtgcgtatgctctac
tacctgaaacaggaagtgatcggcgaacattcagactctgtcctgaagggggctgacatc
agggatgttgatatctggatgcctgagatggagcagcaggaggttcctgcaggatggtgg
gacggagaggccgaccgctctctgctcacaggcgtatttaaacatggttatgaaatgtac
accacgatgcgtgctgatccgtgcctctgcttcctggagagagccggtcggcctgatgac
aaggccattgacgctgagcagcacactggtgacgcagagctgggagacgatgctgactat
gataagtactcggaggacccggagtttaagcctgcgtcaagacacgccaaagatcttttt
gatgagcctgactccatgaacgtggacgatgagatctccgtggaggacaaggtggggcca
gtgatcgtagaaaacgtatccagtcagagcggcgcgtgtgactggccctccagctcgtca
ctcacggcgcggctgcggcggctcatcacagctttccagcgcagctacaggcaggagcag
ctgaagatcgaagccgaggcgaagggcgaccgcaggcgcaggcggtgcgaacaggccagc
aagctgaaggagatcgcacggcaggagcgccagcagaggtggactcgtagggaagaatgt
gacttctaccgtgtggtgtcgacttttggtgtggagaagataaagaaggagacgggtctg
caagaggccggagaccccgagttcgactggaaccgcttccgaaccttcgctcgtctggat
aagaagactgacgagagcctcagcagatacttccgctcttttgtagccatgtgtcggaga
gtttgccacctcaggccaggccggggtgaagatccgtcagaggtctcctcagctgtcgcc
cccatcacagaggagcgtgcttcccgaaccctttaccgtatcagcctcctgcgccgcctc
cgagagcgagtcctgccccacacctccctggaggagcgtctgcctctggctccgaccagc
tccgagctacccgcttggtggaacataccagaacacgatcgccagctgatgctgggcgcc
gcgctgcacggtgtcagccgcactgagctctccatctactcagacccacagttcaccttc
actcaggctcgggacgacttcatcctgaatcaacaagccccgcctcctccacctccaccg
caggcgccgcccatcatacccctcagcaccccaaagactgaggaggacgtgcccgcggtg
aaggaggagggagcggaagaggacggccagctgctcggaggtcagatcagtgctgtcctg
cagagtacaccgttaagccaccatgacggaaaggcacaagggccgggctggagcctgaag
aggagcaagatcagggtgggaaaatcaggaggcaggaagggagagggaggatcggattca
gactctgactctgactcaggctcgtcgtcgtctgatcgatcaggcagcagcgatgacagc
ggagagagtgaggaagagacagaacgagcaggcatgaagctgtgtgacggcgatgaagag
aacagtttactctctatgactacgtctcaggacggtattcctcctcctgacccgctcaga
gtggattggcccaaggaccgtgtgttgatcaaccgtctggacagtctgtgtacgctggtg
gcgagcggtcagtggccctcggggcggcgatacgtctccgaggctcagctcaacccgagc
tcggagctgacgggagacgagatgacgtacacgcggttgatccgcaaacccagcagcatg
cctggtggccccggagcggagggagacgatggagagttcactgtgaagctcctcaaggag
gaagggctgaagctgacgttctctaagcaggccctgatgcctaacggctcaggaggagag
agcagcagccgcaagaagcgcaaggaccaagagttttccgaccaagatggactccacgat
ccactagagcgaactcctcgccgcagggaccctcccacctggttaaaggagaaccctgat
tatgaggtggagggcgacatgctggagcttcttgtgaacaggagcaagaggaagaggagg
aggagggcagacaaagccctgacaggcagtgagaaggtcaaagtcataaacatgaggaca
ggaaagaaggtcggagctgctttctgtccaatgctgcaagacttgagggaatatctggag
gagaatgctgataatgctgtagcacctgagtggtctgactcagttcgaaactctggcttc
ctgccagagaccttcttccaccgactgctgaccgagcactcagacatcccgaagaagagc
cgacgccggcatcaccaccaccaccaccatcaccacactccagagcccacgcccgaggac
cccaacctggacggtgttgaggagacagaggagactctggtgtcagatggagcctacatg
atggacgaggaggacctggagacctcccatcacttcctcaccagtccagactttgacgtt
aaaatggagggcggcgacagcctctcccaaggtgactatgacagctcggatcaggaggcg
ctattagacgatgtcatcatggcacagaaggactctgactcctcgtcaagctccgaggat
tga
DBGET
integrated database retrieval system
