Semicossyphus pulcher (California sheephead): 138611673
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Entry
138611673 CDS
T10596
Symbol
tnn
Name
(RefSeq) tenascin-N
KO
K06252
tenascin
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04510
Focal adhesion
spul04512
ECM-receptor interaction
spul04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138611673 (tnn)
04518 Integrin signaling
138611673 (tnn)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138611673 (tnn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
spul00536
]
138611673 (tnn)
Glycosaminoglycan binding proteins [BR:
spul00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
138611673 (tnn)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_Teneurin
EGF_TEN
Fn3_Dep-1_3rd
Fn3_PBP1
FN3_DSCAM-DSCAML_C
EGF_Tenascin
EGF_2
Fn3_VIN3
NDNF
Arylsulfotran_N
DUF7949
DUF4878
EGF
Motif
Other DBs
NCBI-GeneID:
138611673
NCBI-ProteinID:
XP_069540955
LinkDB
All DBs
Position
Unknown
AA seq
1113 aa
AA seq
DB search
MTTSLPWRALCLLALLCTLSHLSSAELPEASAPEQGVTFSHVYKIDVPGSSSCKLEDGTG
LQTETTQNGENDIIFRHNIRLQTPKCDCDESESFKSLLYRVNGLEEEVNYLKTQCSQGCC
GKGGAGGVDTSCSGYGTYNHDTCSCLCNPGWEGPDCSVSSCPDECNDNGRCVDGKCVCHQ
GFTGDDCSQLMCPDNCNDKGHCVDGKCVCFSHFTGEDCSVQKCPNDCIGNGQCVDGQCVC
DEGFYGEDCSLVLGPQGLRLVQVTDVSLLVEWESVPGAEYYVLTYHPEDDESAMRQVRVP
KSENSHLITGLSPGVTYIVQVYAVIKEIQSKADMIEATTDVTVIDEIKVVGTTEVSIDVD
WKNPSVEVDHFRLRHVDPAGQEEEQNVRMSQEARTKHTIVGLYPGTEYQISVQAIKGTNE
GKSSTVTGATDIDSPSNLVTTVVTEDTATVSWDRVQADIDGYMLSYTTAAGSSADIPVGR
DRTSYRLVGLRPGVVHTVYIWAYKGDRVSRKSSTEAETDLDAPANLSAQDETESSFSVSW
DPVRADIDGYMLTHSSSEGDIVIPLGSDTTSYILTGLRPGVLYTVYIWATKGNKTSRKIS
TQAETELDAPSNALTQDETESSFRVSWEHPEADIDGYILTYSSSEGSSEEIPLGSDISSY
MLTGLRPGVLYTVYIWAMKGSKVSRKISAQAETELDAPANLLARDETESSFSVSWDPVQA
DIDGYILTYSSSEGSSEEIPVGSDSTSYTLTGLRPGVLYTVYIWAVKGSKATRKISTNAE
TDIDSPRDLKATDVTVDSAVLTWIPPLADIEGYILTYRDEQGNMETVEKRLGARESRFSV
SSLETGKSYIVTIIAYRGNKRSRVVETIFKTVGLMYPFPMDCVQIMKNGNKKSGIYTVYI
NNDRAKPIEVFCDMDTDGGGWLMLQRRTTGQLDFMKRWRQYIAGFGNMTGEFWIGLDKIY
ELTNTPTHYELRFDLGLGSERAYAVYDNFKIAPVRQKFKLTIGNYRGTAGDAMTYHQGRP
WTTVDSDNDIALGNCALTHRGAWWYKNCHLANLNGKWGDERHSLGVNWEPWKGHLTSLDF
TEMKIRPVGAMSSRKRRSLMAKEKSKTKNLHKI
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccagtctcccgtggagggccctgtgcctgctggccttactgtgcaccttgtca
cacctcagctcggccgagctgccagaggcctcagcccccgagcagggagtcaccttcagc
cacgtctataaaattgacgtcccagggagctccagttgtaaacttgaagatggaacaggt
ctgcagacagagaccactcagaatggagagaacgacatcattttcagacacaacatcagg
ctgcagacgccaaagtgtgactgtgatgagtcggaaagcttcaagtcactcttgtacaga
gtgaatgggctggaggaagaagtcaactacctgaagacccagtgtagtcagggatgttgt
ggaaaaggtggagctggaggggtggacacaagctgtagtggctatggtacctacaaccac
gacacctgcagctgcctctgtaacccgggatgggaaggcccagattgctccgtgtcctct
tgccctgacgagtgcaatgacaacggtcgatgtgtggacgggaagtgtgtttgccatcag
ggcttcacaggagacgactgcagccagctgatgtgtccagataactgcaacgacaaggga
cactgcgtggatggaaaatgtgtgtgtttctcgcacttcaccggtgaggactgcagcgtc
cagaagtgtcccaatgactgcattggtaacggccagtgtgtggacggccagtgcgtctgt
gatgaaggcttttatggggaagactgctcattagtgctcggccctcagggtctgcggttg
gtccaggtgactgacgtctctctcctggtcgagtgggagtcagttcctggagcagagtat
tacgttttgacatatcatcccgaagacgatgagagcgccatgcggcaggttcgggttccc
aagtcagagaactcgcacctcatcacaggcctgtctccgggggtcacctacatcgtccag
gtgtatgctgtcatcaaagaaatccaaagtaaagcggacatgatcgaagctaccacagat
gtcacagttatcgatgaaatcaaagttgttggcacgacggaagtctctatcgacgtggac
tggaagaacccgtcggttgaggtggatcacttcaggctgagacacgtcgacccggcggga
caggaggaggagcagaacgtacggatgagccaggaggcgcgcaccaaacacactatagtg
ggtctatatccaggaacagagtaccagatctcagtccaggccatcaaaggaaccaatgag
gggaaatcttctactgtcactggtgctacagacatcgattctccctccaacctggtcacc
actgtagtaaccgaggacactgcgactgtttcatgggatcgagtccaggcagatatagat
ggctacatgctgagctacaccactgctgcgggctccagtgcagacatccccgtaggccgt
gacaggacctcgtacaggctggttggcttgaggcccggagtcgtccacaccgtgtacatc
tgggcctacaagggagacagagtgagcaggaagagttcaacagaagccgaaacagacctg
gatgctcctgctaacctctcagctcaagatgaaacagagtccagcttcagcgtgtcctgg
gatccagtccgggccgatatagacggttacatgctaacccacagctcctctgagggcgac
attgtgatcccactcgggtcggacacgacctcttacatcctgacaggtttaaggcctggg
gtcctctacacagtctacatctgggccaccaaaggaaacaaaacaagcaggaagatctcg
acacaagctgagacagagctggacgctccctctaacgccttgacccaagatgaaacagag
tccagcttcagggtgtcctgggaacacccagaggcagatattgatggctacatcctaacg
tacagctcctctgagggctcaagtgaggagatcccacttgggtcggacatttcttcatac
atgctgaccggcctgaggcctggggtcctctacacggtctacatctgggccatgaagggg
agcaaagtcagcaggaagatttcagcacaagcagagacagaactggatgctcctgctaac
ctcttagcccgagatgaaacagagtccagcttcagcgtgtcctgggatccggtccaggca
gacattgatggctacatcctaacctacagctcctctgagggctcaagtgaggagatcccg
gtcgggtctgacagcacctcttacacgctgactggcctgaggcctggggtcctctacacg
gtctacatctgggctgtcaaagggagcaaagccactcggaagatttcaacaaatgctgag
acagacatcgattccccccgggacctgaaggcgacagacgtgacggtggactctgctgtt
ttgacctggattcctcctctcgctgacattgaggggtacatcctcacatacagagacgag
cagggcaacatggagactgtcgaaaagcggctcggagccagagagagcagattttctgtc
tccagtttggagacggggaagagctatatcgtcaccatcatcgcctacaggggaaacaag
aggagcagggtggtggagaccatctttaaaacagttggtctcatgtaccccttccccatg
gactgcgttcagatcatgaagaatggcaacaagaagagcggtatctacaccgtctatata
aacaacgaccgcgcaaaaccgatcgaggtgttctgcgacatggacactgacggaggcggc
tggctgatgctccagcgtcgtaccactggccagctggacttcatgaagcgctggaggcag
tacatagcaggttttggcaacatgacaggcgaattctggatcggtctggataagatatac
gagctcaccaacactcccactcactacgagctgaggttcgacttgggcctgggctcagag
agagcgtacgctgtatatgacaacttcaagattgcaccggtcaggcagaagttcaaactc
actattggcaactaccgtggaacagcaggtgatgctatgacctaccaccaaggccggccc
tggaccactgtggactctgataatgacatcgccctgggtaactgtgccctgacccaccgc
ggagcctggtggtacaagaactgtcacctggccaacctcaatggaaaatggggagacgag
aggcacagtttgggagtgaactgggagccgtggaagggccacctgacgtccctcgacttc
accgagatgaagatcagacctgtgggagccatgtccagcaggaagaggcgatcgctgatg
gccaaagagaagagcaaaaccaaaaacctccacaagatataa
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integrated database retrieval system
