Semicossyphus pulcher (California sheephead): 138611881
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Entry
138611881 CDS
T10596
Symbol
tnr
Name
(RefSeq) tenascin-R
KO
K06252
tenascin
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04510
Focal adhesion
spul04512
ECM-receptor interaction
spul04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138611881 (tnr)
04518 Integrin signaling
138611881 (tnr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138611881 (tnr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
spul00536
]
138611881 (tnr)
Glycosaminoglycan binding proteins [BR:
spul00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
138611881 (tnr)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_3rd
Fn3_PBP1
Pur_ac_phosph_N
EGF_Tenascin
FN3_Tor_3rd
EGF_2
Interfer-bind
Fn3_VIN3
DUF4998
Fn3_ROS1
DUF7949
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
138611881
NCBI-ProteinID:
XP_069541237
LinkDB
All DBs
Position
Unknown
AA seq
1386 aa
AA seq
DB search
MQLAQHRLRAAVPSTGRILALALFLALQGAAHAAPSGDNKLVRTTRVRRQTPGGDQPPFD
SSANQTLREQPLVFNHVYNINVPLESLCSVDLDASAPPDPGDGSRGELGSRPSMEGPMDP
SGPTEYTEQTLDADSQMTFTHRINIPKAACGCPATTTIQQLATRVEMLEREVSLLRAQCG
SGCCGESSAMGRLDFVPGCSGHGSFSFDLCGCICEEGWGGKNCSEPRCPDDCSGQGVCVE
GECVCDRDFGGDNCSEPRCPSDCSGRGLCIDGECVCEESFTGEDCMVGRCLNDCSDQGLC
INGTCQCRPGYVGEDCSLVYCANNCSKKGVCKDGFCACQDGFAGDDCNSVAPAMNLKVRG
VTDRTIDLEWEGSVVLTDFLVTYTPSSPGGVQLEIRLPGNITVCSIAGLDAGIEYNINVF
AVINNSISVPASITVSTYLSNPDSLVFKSITETSVEVRWQPFFYSFDGWEISFIPKDNDG
GMTAQLPSTITSFVQTGLRPGEEYTVNLVALRDVGRSQPVTATITTLIDGPTQLIVRDVS
DTVAFVEWTSPKAKIDQIVLRYGLVGGEGPRTTFRLQPTLSQYSLQVLRPGSRYEVSVSG
VRKGNESGSISTEFTTALSFFSEIDAPKNLRLVSKTSTTLELEWDNSEAEVEGYQVVYST
LAGDLYDKVIVPRNEGVTTKTTLTDLLPGTEYGIGISAMKGSNQSTPATMNARTGLDVPL
DLTVTASTDNTITLLWGVVQGPIDHYKVTYTSSSGVTSELTVPKDVTTVTLTELEPGTEY
TITVAARRGRQQSTAATIDAFTGIRPVTHLYLSEVTSDSVSVAWSAPAPPADLFILSYSS
ADGTDTSKVTLDGSKTRSLVQGLLPSTAYTISLITIQGDITSEPITASLTTGMDPPKEMT
VSDVSEDAVTISWIRPLAPFEYYKLSYQSARGRVDSVVIDSDVTNYTLSSLFPATEYEIS
LNAVQGSQESKVVTTSVFTAMDMPAELTALNITPQGALLRWNPPLSNVDNYVLTLTHNQV
TADTFLVEGNKQEHQLSNLKPSTTYSVALYATKGPLTSGTVITNLQTPMDAPLNLTASEV
NHRSALISWQPPIAEIDNYMLTYKTTDGSRKELILDAEDTWIRLEGLAETTEYTVKLQAA
RGLDTSAVVSTTFTTGSRLFATPQNCAQHLLNGENLSGVYTIYVNRDPSQGVQVYCDMTT
DEGGWIIFQRRQNGLTDFSRKWSDYRVGFGNLEDEFWLGLDNIQKIAAQGRYELRIDMKD
GQESVYANYDKFSIGDARNLYKLRIGEYNGTAGDSLSYHQGRPFSTKDRDNDIAVTNCAL
SYKGAWWYKNCHRANLNGKYGESRHSQGINWYHWKGHEFSIPFVEMKMRPFNFRSISSKR
RRSAPV
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atgcaactggcacagcatcgtctcagggccgctgtgccctcaacaggccggatcctggct
ttggctctgtttctcgctctacagggtgctgctcatgctgctccatcaggagacaacaag
ctggttcgcaccaccagagtgaggagacagaccccagggggggatcagccccccttcgat
tcctcagccaaccagacgctgcgggagcaacccttggtcttcaaccacgtctacaacatc
aatgttcccttggagtctttgtgctctgtggacctggacgcctccgcaccacctgaccca
ggtgatggttctcgtggtgagttgggctccagaccgtcgatggagggtccgatggatcca
tctggaccaacagaatacactgagcagacgctggatgctgatagccagatgacattcact
caccgcatcaacatcccaaaagctgcatgtggctgtcccgcaacaaccacaatccagcag
ctggccaccagggtggagatgctggagagggaagtgtccctgctcagagctcagtgtgga
tctggatgctgtggggagagttcagccatgggtcgtttggacttcgtcccaggctgcagc
ggccacggcagcttcagctttgacctatgcggctgcatctgtgaggaaggctggggcggc
aaaaactgctccgagcctcgctgtcccgacgactgctccggccagggggtgtgcgtggaa
ggggagtgcgtgtgtgaccgtgactttggaggcgacaactgctctgagccgcgctgccct
tcagactgctcgggccgcgggttgtgcatcgacggggagtgcgtgtgcgaggagtccttc
accggcgaagactgcatggtcgggaggtgtcttaacgactgctctgaccaggggctgtgc
atcaacggcacgtgccagtgcaggcctgggtatgtgggagaggactgctcgctggtgtac
tgtgccaacaactgcagcaagaagggagtctgcaaggacggattctgtgcctgccaggac
ggctttgcaggagatgattgcaactctgtggcacctgctatgaacctgaaggtacgaggc
gtgactgatcgcactattgacctggaatgggagggttcagttgtgctgacagatttctta
gtgacatacacgccgagcagccctggaggtgtgcaactagagataaggctccccggcaac
atcaccgtctgctctatcgcaggccttgacgctggcatagagtacaacatcaacgtgttt
gctgtcattaacaacagtatcagcgtccctgccagcattaccgtttccacctatctctcc
aatccggatagtttagtcttcaaatccatcacggagacatcggtggaggtccggtggcaa
ccgttcttctattccttcgatggatgggagatcagcttcatccccaaggataacgatggc
gggatgactgcacagctgcccagcaccatcacttcctttgtgcagactggattgagacca
ggagaggagtacaccgttaacctggtggcactgcgagatgtgggacgaagccagccggtc
actgctactatcacaacattgatcgacggccccactcagctgatcgtgcgggatgtttcg
gacaccgtagcgtttgtggagtggacatcgcccaaagcaaagattgatcagatcgtgttg
cgttatggcctggtgggaggagagggtccgcggaccaccttccgcctccagcccacgctc
agccagtactccctgcaggttctgcgtcccggctctcgttacgaggtgtctgtgagcggt
gtgaggaagggaaacgagagcggatctatttccactgaatttactaccgctttatcgttc
ttctcagagatcgatgcccccaagaaccttcggcttgtgtccaagacctccaccaccctg
gagcttgaatgggataacagtgaggctgaggtggagggctaccaggtggtgtacagcacc
ttagcaggagacctgtatgataaagtcatcgtccctcgtaatgagggagtcaccactaag
accactctcacagacctgctcccaggcacagagtacggcatcggcatctctgccatgaaa
ggcagcaaccagagcacaccggcgacaatgaacgccaggacgggtctggatgtgcctctg
gacctcacagtgacagcttctacagacaacaccatcactctcttgtggggtgtggtccag
ggtcccatcgaccattacaaggtcacctacacgtcctcctctggcgtcacatctgagctg
acggtgcctaaagatgtaaccaccgtcaccctgacagaactcgaacctggcactgagtac
accatcactgtagcagcgagaagagggaggcagcagagcacggcagctaccatagatgct
ttcacaggaatcaggcccgtaactcacctctacttgtcagaggtgacttcagactcggtg
tcggtggcctggagcgccccggcgccgcctgctgacctcttcatcctgagctacagctct
gctgacgggaccgacacctctaaggtgacgctggacggctcgaagacgaggtcactggtc
cagggtctgctgccgtccactgcatacaccatcagtctgatcacaatacagggagacatt
acctctgagcccattacagcttcactcactacaggcatggacccaccgaaagagatgacg
gtgtcagacgtgagtgaagacgcagtgaccatctcttggatcagaccactggctccattt
gaatactataaactgtcctaccagtcagccagaggtcgagtcgacagcgtggtgatcgac
agcgatgtgaccaactacaccttgtcgagcctgtttcctgctacggagtacgagatcagt
ctcaacgctgtccaggggagtcaggagagcaaagtggtcaccacctcggtcttcacagca
atggacatgcccgctgagttgacggctctgaacatcactccacaaggagccctgctgagg
tggaatccccctctttccaatgtcgacaactacgtgctgaccctcacgcacaaccaagtc
acagcggacactttcctcgtggaaggcaacaagcaggagcaccagctgtccaacctaaag
cccagcaccacctactcagtagcgctctacgccaccaaaggacccctcaccagcggcacc
gtcatcaccaacctccaaacacccatggacgcaccgctcaacctgaccgccagtgaagtg
aatcaccgcagcgctctcatctcctggcaaccgccaatcgccgaaattgacaactacatg
ctcacctacaagacaaccgacggcagccggaaagagctgatcctggatgcagaggacacg
tggatccgactggagggactggctgagacgacagagtacactgtcaaactccaggctgca
agaggactcgacaccagcgctgtagtctccactaccttcaccacagggagtcgtctgttt
gcaacacctcagaattgtgcccaacacctgctgaacggagagaatctgagcggcgtctac
accatttacgtcaacagagaccccagccagggcgtgcaggtgtactgcgacatgaccact
gatgaaggaggctggattatattccagcgtcgacagaatggcctgactgacttttccagg
aagtggagtgactatcgcgtcggctttggaaacctggaggatgaattctggctcggtttg
gataacatccagaagattgcagctcagggacgctatgagctgaggatcgacatgaaggac
ggacaggagtcagtctacgccaattatgacaagttctccattggagatgcgagaaacctg
tacaagctgaggataggagagtacaacggcacggctggtgactctctgagctaccaccag
ggccgacccttctctacgaaagacagagacaatgacatcgctgtcactaactgtgccttg
tcctacaaaggagcctggtggtacaagaactgccaccgggccaacctcaacgggaaatac
ggcgagtccagacacagtcagggtattaactggtatcactggaaaggccacgagttctct
attcctttcgtggagatgaagatgaggccgttcaacttccgtagcatcagcagcaagagg
aggcggtccgcccctgtataa
DBGET
integrated database retrieval system
