KEGG   Semicossyphus pulcher (California sheephead): 138611921
Entry
138611921         CDS       T10596                                 
Name
(RefSeq) probable flap endonuclease 1 homolog
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
spul  Semicossyphus pulcher (California sheephead)
Pathway
spul03030  DNA replication
spul03410  Base excision repair
spul03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:spul00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    138611921
   03410 Base excision repair
    138611921
   03450 Non-homologous end-joining
    138611921
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spul03032]
    138611921
   03400 DNA repair and recombination proteins [BR:spul03400]
    138611921
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:spul04147]
    138611921
DNA replication proteins [BR:spul03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    138611921
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     138611921
DNA repair and recombination proteins [BR:spul03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     138611921
Exosome [BR:spul04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   138611921
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc XPG_I_2 HTH_Tnp_ISL3
Other DBs
NCBI-GeneID: 138611921
NCBI-ProteinID: XP_069541282
LinkDB
Position
Unknown
AA seq 348 aa
MGITKLADLIRSDAPDAISHKDISDYTGKVIALDTSIVVNQFRAATPLLSPLTGLFFRTL
TFLEHDIKPVFVFDGKPPKEKTAVLQKRAEAAGWSWHNHTGTASSMTRDCLQLLKLLGVP
VVQAPGDAEAWCAWLVRQGTVDAVASEDMDTLPFGASILIRQLNSKKDSEVTEYSLSKLL
EKLQISHKEFVDLCILLGCDYCDKIPQLGPKRALKLIQKHRNIEDVVLHVKRKTHPVPNF
WKYKEARKIFLDAPQTEAPDLTWTEPDEEALVGFLCHTNHVKEDRIRRRMERFREARDSK
REEREKERAAGRSRQTRMEDFFRVTRKRALPVEAVNSLSSKIKRQKLK
NT seq 1047 nt   +upstreamnt  +downstreamnt
atggggatcactaaactggcagatttaatccgctcagatgctccggatgctatttctcac
aaggatataagtgactatactggaaaagtaatcgcactggatacctcgattgttgtgaac
cagtttcgtgcagcgacacctttactaagccccctgacaggtctcttcttccgcacgctc
accttcctggaacatgacataaagccagtttttgtgtttgatggaaagcctcccaaggag
aagacagctgttcttcagaagcgagcggaggcagctggttggagctggcacaaccataca
ggcacagcatcatccatgaccagagattgtctccagctcctgaaacttctgggtgtaccc
gttgttcaggctccgggggacgctgaggcctggtgcgcctggctggtgagacaggggacc
gtggatgctgtggcatcagaggacatggacacactgccgtttggggccagcattctcatt
cgccagctgaactccaagaaggacagtgaagtcactgaatattctttatccaagctgtta
gagaaacttcaaatcagtcacaaggagttcgttgacctgtgtatcttattgggctgtgac
tactgtgataagatcccccaattgggacctaagagagctttgaaactgatccagaagcac
cgcaatattgaggatgtggttttgcacgtcaaaagaaagacccatcctgtgccaaatttc
tggaagtacaaagaagcacggaagatcttcctggatgcacctcaaaccgaagctcctgat
ctcacctggaccgaaccagatgaagaagctctggttgggttcctttgtcacaccaatcac
gttaaggaggacaggatccgtcgaaggatggagaggttccgtgaggcgcgggacagtaag
cgggaggagagagaaaaggagagggcagcaggacgcagcaggcagactcgcatggaggac
ttcttcagagtcaccagaaagagggctctacccgtggaagctgtaaactctttaagcagc
aaaataaagagacaaaagttaaaataa

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