Entry |
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Name |
(RefSeq) regulator of nonsense transcripts 1
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KO |
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Organism |
spul Semicossyphus pulcher (California sheephead)
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Pathway |
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Brite |
Enzymes [BR:spul01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
138612077
5.6.2.5 RNA 5'-3' helicase
138612077
Messenger RNA biogenesis [BR:spul03019]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
138612077
mRNA cycle factors
Common to processing body (P body) and stress granule
138612077
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SSDB |
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Other DBs |
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LinkDB |
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Position |
Unknown
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AA seq |
1112 aa
MSVEAYGPSSQTLTFLDTEETELLGADTQGSEYDFTDFTLPSQTQTQGQTQSQLDNQVNG
PDGLLQNGDDPVVKASQLLAELNFEEDEEDTYYTKDLPSHACSYCGIHDPACVVYCNTSK
KWFCNGRGNTSGSHIVNHLVRAKSKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKA
DSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQ
INKLEELWKENPTATLEDLEKPGVDEEPQHVLLRYEDAYQYQNIFGPLVKLEADYDKKLK
ESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPPWKGIGHVI
KVPDNYGDEIAIELRSSAGAPVEIPHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYI
YHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVT
SATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLAL
HNQTRNMDSMPELQKLQQLKDETGELSSSDEKRYRALRRTAERELLMNADVICCTCVGAG
DPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLS
QSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAGDRVKKGFDFQWPQ
PDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQIGIITPYEGQRS
YLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNV
ALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVN
TINPGGRFMSTAMYDAREALIPGSVYDRSSNGRTSNMYFQTHDQIGMIGTGPSPMTSMNI
PIPFNLVMPPIPPPGYMGQVNGPTGGRGGGMKGKSGGGGGGGARGGRQRNRGNMGNHGGG
DRGQHGGHMSGSQASQDLGSQPFSQGPLTQGYINMSQPSQMSQPGLSQPELSQDSYLGDE
FKSQIDVALSQDSTYQGERAYQHGGLTGLSQY |
NT seq |
3339 nt +upstreamnt +downstreamnt
atgagtgtcgaggcgtacgggccgagctcgcagactctaacgttcctcgacaccgaggag
accgagctgctgggagcggacacccagggctccgagtacgacttcaccgatttcactctg
ccgagccagacccagactcaaggccagacccagagccagctggacaaccaggttaatggc
cctgacggcttgttacagaatggagatgaccctgtagtaaaagccagtcagctgctggca
gagttgaactttgaggaggatgaggaggacacctactacaccaaggatcttccctcacat
gcttgcagttactgcgggattcatgatccagcctgtgtggtctactgcaacaccagcaag
aagtggttctgtaacggccgtggaaacacatccggcagccacattgttaaccacctggtg
agagcaaagtccaaggaggtgaccctacataaagacggccctctgggggaaacagtactg
gagtgctacaactgcggctgtcgcaacgtcttcctcctgggcttcatccccgctaaagct
gactcagtagtggtgttactgtgcaggcagccatgtgcgagccagagcagcctgaaggac
atcaactgggacagctcgcagtggcagccgctcatccaggaccgctgcttcctgtcctgg
ctcgtcaaaatcccgtcagagcaggagcagctcagggctcgtcagatcaccgcccagcag
atcaacaagttggaggagctctggaaggaaaatcccactgcgaccttggaagacctggag
aagcccggtgtggacgaggagccccagcatgtgctgcttcgctacgaggatgcctaccag
taccagaacatctttggtcctcttgtgaagctggaggctgactacgacaagaaactcaaa
gagtcccagactcaagacaacatcacggtcagatgggacttgggcctgaataagaagagg
atcgcttatttcactcttccaaagacagactcggacatgcgcctgatgcagggagatgaa
atttgcctgcggtacaaaggagacctggcccctccttggaaaggcatcggacatgtgatc
aaagtccctgacaattacggtgatgagatcgccatagagctgaggagcagtgccggggct
ccagtggagatcccacacaacttccaggtcgactttgtgtggaagtccacgtcctttgac
aggatgcagagcgctctgaagacctttgctgtggatgagacttcagtgtctggttacatc
taccacaaactgctgggacacgaggtcgaggatgtgatcatcaaatgtcagctgcccaaa
cgcttcactgctcagggcctgcctgaccttaaccactcccaggtgtatgctgtgaagacg
gtgctgcagcgtcccctcagtctgatccagggtcctcccggcacaggaaagacggttacc
tctgccaccatcgtctaccacctggctagacagggcaacgggccagtgctggtgtgtgct
cccagcaacattgccgtcgaccagctgacggagaagatccaccagactgggctgaaggtg
gtgcggctgtgtgcaaagagcagggaggccatcgactcgcctgtgtccttcctggctctt
cacaaccagacccgtaacatggacagtatgcccgaacttcaaaagctccagcagctgaag
gacgagaccggagagctgtcctcctcggacgagaagcgctacagggcgctgagacgcact
gctgagagggagctgctaatgaatgccgatgtgatctgctgcacctgtgtcggtgcgggc
gatcctcgtctggccaagatgcagttccgctcaatcctgattgatgagagcacacaggcc
actgagccagagtgcatggtgcctgttgtcctgggggccaaacagttgattctggtgggc
gatcactgccagctgggccctgtggtgatgtgtaagaaggcagctaaagccggtctgtcc
cagtctctgttcgagcgtctggtagttttggggatcagaccgatccgtctgcaggtccag
taccgcatgcacccggccctcagcgccttcccctccaacatcttctatgagggctctctg
cagaatggagtcactgccggcgaccgtgtgaagaaaggctttgacttccagtggcctcag
cctgacaagccgatgttcttctatgtcacccaaggccaagaggaaattgccagctctgga
acatcctacctcaacaggactgaggcagccaatgtggagaaaataaccacgaggttgctg
aaggccggagcgaaaccagatcagatcggcatcattacgccctacgagggacagaggtcc
tacctggtccagtacatgcagttcagtggctccctccataccaaactctaccaggaggtg
gaaatagccagtgtggacgcctttcaaggcagagagaaggacttcatcatcctgtcctgt
gtgagggccaatgagcaccagggcatcggcttcctcaatgatccccgacgtcttaacgtg
gcgctcaccagggccaggtatggtgtgatcattgtgggaaacccaaaggccctgtccaag
cagcctctgtggaaccacctgttgaactactacaaggagcagaaggtcctggttgaaggg
ccccttaacaacctgagggagagcctcatgcaatttagcaagccccgcaagctggtcaac
accatcaaccctggcggtcgattcatgagcacagccatgtatgatgccagggaggccctg
attcctgggtctgtttatgaccgcagcagcaacggacgtacatcaaacatgtatttccag
acccatgaccagattggaatgattggcacaggccccagtcccatgacatccatgaacatc
cccatccccttcaacctcgtgatgccccccatacctccgccggggtacatgggacaggtc
aatggacccacaggaggtcgcggtggaggaatgaaaggcaagtcaggcggtggaggagga
ggtggggctcgaggtggccgccagcgaaaccggggcaacatggggaaccacggaggagga
gaccgagggcagcatggaggccacatgagcggcagccaggccagccaggacctgggctcc
cagccgttctctcaggggcctctgacgcagggctacatcaacatgagccagccgtcacag
atgagccagcctggactctcccagcctgaactctcacaggacagttaccttggagacgag
ttcaagtcccagattgatgtggctctgtcccaggactccacctaccagggggagcgggcc
taccaacacggtggtctgactggactgtcccagtactag |