Semicossyphus pulcher (California sheephead): 138612504
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Entry
138612504 CDS
T10596
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4
KO
K06245
laminin, beta 4
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04510
Focal adhesion
spul04512
ECM-receptor interaction
spul04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138612504 (lamb4)
04518 Integrin signaling
138612504 (lamb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138612504 (lamb4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMB1
LAMININ_IV_B
EGF_LMN_ATRN
LAMB4
FKBP15
Motif
Other DBs
NCBI-GeneID:
138612504
NCBI-ProteinID:
XP_069541908
LinkDB
All DBs
Position
Unknown
AA seq
1780 aa
AA seq
DB search
MIFILLFVFLPASLPQDLQDQCPGGSCNPPLGDLMAGRAAQLSASSTCGLDGQQNYCIIG
YLEEEQKCFTCDSRLTYNRDSNPNSHRIENIITTFDPERKLKWWQSENGVHHVSIRLDLE
TVFQFSHLVLAFKSFRPAAMLVERSKDFGRSWKVFRYFAEDCSLHFPSVSNEPAASVNDV
VCDSRYSGSEPSTDGEVVLKALDPIFEIENPYAANIQDLITLTNIRVNFTRLFTLGDTLL
ARRRRNPQDKYYYALYNMVVRGSCFCNGHASECTPVDPGRGDVFIQTGTVHGRCVCQHNT
AGENCERCQDFHHDSPWRPGGENTADICRRCDCNGHSDSCHFDMAHFDATGGVHGGICDN
CRHDRTGPQCEHCRPFLYQDPQRGRDDPQACIPCDCDPAGSQGGGLCDNRSGRCVCKENV
EGQRCDRCKQGFFNLRADDSAGCQVCRCHVLGSVRSCDQLTGSCECDRFASGPLCDRCLT
GFWGLGNTVFRCSPCDCDIGGAHSNMCSPEDGQCHCLPNMVGRRCSNPAPGYFLPPLDYF
LYEAELAAPLLGGDPSSPSATPPPSSSSSLLNPQVLPACEQYYREQGYDFKISNGRVVVV
RRTRRLSRRRRQQGSIPLDPGQALQIIPRQRSADHAVTWTGLGLVRVLEGAGLRFTVDNL
PSSMDYKLVIRYEPEAPSDWLASVSITKLSPGDSGCSSDPTGSKNLILPGNSRGSVLDSS
VCLNAGGRYFVDVVFDKQSRLDGLSSHILIDSMGLIPSIESVQDFCSQSDLDSFRRFRCI
GLAAELGSQELVPELCEGLIRSMSARIHQGAVPCRCNAIGSLGSSCSKLGGFCECKPNVI
GRCCDTCSLLTFGFGPDGCKPCECDPRGSMSEMCDQVRGQCACRSEVAGRRCDRCQTGFW
GFPFCRVCECNNRSDECEEETGECVNCREHAAGPQCDRCEEGYYGNPCQPCLCPDIQSSG
RFFATSCQQDPQSLSPFCICREGHTGAHCDRCSPGFYGDLLLPGATCEECLCNNNIAPDD
RDACDSVTGECLRCLHHTTGPRCDTCKPGYYGNAQDQDCKECSCDRRGTEVTRCPLESPC
FCDSVTGQCPCRKGVVGVLCDECEDGHWNLDGTSGCQPCSCDPTNSFSNMCNKVTGQCPC
RPEFGGRQCDECGENHFGNPDLQCISCDCNVEGTERPSCDSETGECICRVGITGIFCDQC
APGYDSAFPACKQCHPCTTLWAQNVTDVQRAAQRMRTFIPRLDNKLQPGDSRQLLQMLEM
HSKLDSLSNLTGHSPRKVEKMEKLCTMIRKLKDAVDPNMILIDLSPLVNTEIDNIQMEFK
KLLNILKDKLIEDTYRKEPELVLESLDKIQKLHKSFMSDENRVRISSRAIEDSMDTRQEA
KLKLNMCNGRGELEPLEKKFKELSIVNLNRKICGGPGLKDCSGCGGALCDGVVPVSQKAS
ETAERTKQELVTLPSRLQESKNKIDDAKQAAQDSKDQAKDLQDRINDNMDSFEREKQKTK
DLIQRVKDYLMDDMIPPEDIEKLARAVLDIQLPRSPDQIHSMINDINKLMTNATNFQDDL
PILEEHAKTVQDLLQKAQDLKERTKNINVTEISRDIYKAEKAQSKANDNLETASKDSDKT
RDLVQNIKEELDDNETKLMSGRAEDLRDEIEDLMKKTEQNRNMARDARDAADSALNNTTD
TQTELNEVLRLFGLLKEKKTRVEGQSNAGERLKMILDEAAAMKGDMEDKLSQIQDLEKKI
QELIRSKEDKAAEVTKLLETVDSLRQEISKRADGYTTCTS
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atgatcttcatcctcctctttgtttttcttccagcatctctgccccaggacctccaggac
cagtgtcccggtgggtcctgtaaccccccgctgggtgacctaatggcaggtcgagcagct
cagctgtctgcctcgtccacctgcggtctggacggacaacagaactactgcatcattgga
tacctggaggaggagcagaaatgctttacatgtgactcaagactaacctacaatcgtgac
agcaaccccaacagccaccgcattgagaacatcatcacgacctttgaccctgagaggaaa
ctaaagtggtggcagtctgagaacggagtccatcacgtcagcatcaggctggatctggag
acggtgttccagttcagtcatctggtcctcgccttcaagagttttcgtccagcagccatg
ttggtggaacgatcgaaggattttggacgaagttggaaagttttccgttactttgcagaa
gattgttcgcttcattttccctcagtgtccaacgagccagctgccagtgtcaatgatgtt
gtctgtgacagccgatactcaggatcagagccgtccactgatggagaggtggtgctgaag
gctctggatcccatctttgaaatagaaaacccatatgcagccaacatccaagatctgatc
accttgacaaatataagagtaaacttcactcgtctcttcacgctgggcgacactctgctg
gctcgacgtcgcagaaaccctcaggacaaatattactacgctctttacaacatggtggtc
agaggaagctgcttctgtaatggacacgccagtgagtgtacacctgtggacccgggacgg
ggggacgtgttcatccagactggcacggttcacggtcgatgtgtttgtcagcacaacact
gctggagagaactgtgagagatgtcaagactttcaccatgactccccctggaggcccgga
ggagaaaacacagcagacatctgcaggagatgtgactgtaacggtcactcggactcatgt
cattttgacatggcacattttgacgcgacaggtggcgtacacggcggcatttgtgacaac
tgccgtcatgacaggacgggtccacagtgtgaacattgtcgaccttttctgtatcaggat
cctcaaagaggcagagatgatccacaggcctgcataccatgtgactgtgacccggctggc
tctcagggtggcggtctgtgcgacaatcggagtggtcgatgtgtgtgtaaagaaaacgtg
gagggtcaacgctgcgatcgctgcaaacaaggtttcttcaatctgagagcggacgattcg
gcgggctgtcaggtgtgcaggtgtcatgttttgggaagtgtcaggtcatgtgatcagcta
acaggaagttgtgaatgtgaccgctttgcgagtggaccactgtgtgatcgatgtctgaca
ggtttctggggtttaggaaacactgtgttcaggtgttcaccctgcgactgtgacatcgga
ggagctcacagcaacatgtgttctccagaggacggacagtgtcattgtttgcccaacatg
gtgggtcggcgctgctctaaccctgcccctgggtacttcctgcctccactggactacttc
ctgtatgaggcggagctcgctgctccactgcttggaggggacccttcttctccttctgct
actcctcctccatcttcttcttcttctctgttgaaccctcaagtgttaccggcctgcgag
cagtactacagggagcagggctacgactttaagatcagtaacggacgagtcgttgtggtt
cggaggactcgtcgactttcccgccggaggagacagcagggcagcatccctctggaccca
ggtcaagcccttcagatcattccccgtcagaggtcagctgatcacgccgtcacctggacc
ggtctgggattggtcagggtgctagagggggcggggcttagatttacagtggacaatctc
ccatcatccatggattacaagcttgtgattcgctacgagccagaggctccatctgattgg
ctggcttcagtgagcattactaaactgtcaccgggcgacagtggctgcagcagtgacccg
acaggaagtaaaaatctgattcttcccggaaactccagaggcagtgttctggactcctcg
gtgtgcctgaatgcaggcggacggtattttgtggacgtcgtatttgacaaacagtcgaga
cttgacggcttgtcgtcacatatcctgatcgactcgatgggtttgattcccagcatcgaa
tctgtgcaggacttctgctcacagagcgaccttgactctttccggcgctttcgctgcatt
ggattggctgctgagctcggctcgcaagagttggtaccagaactctgtgagggactcatc
aggagtatgtcggctcgaatccaccaaggagccgttccttgtaggtgtaacgcgatcggt
tctctcggatcatcctgcagtaaactgggagggttctgtgaatgtaaacccaatgtgatt
ggccgttgctgtgacacctgttcactactgacatttggcttcggacctgatggctgcaaa
ccttgtgagtgtgaccctcgtggctcgatgtcggagatgtgcgatcaggtcagaggtcaa
tgtgcatgtcggtcagaggtcgcaggtcggcgctgtgatcgctgtcagactggattctgg
ggtttccccttctgtcgggtctgcgaatgtaacaaccggtcagatgagtgtgaagaggag
accggagagtgtgtgaactgcagggagcatgctgctggaccacaatgtgacaggtgtgag
gagggttactatggtaacccctgtcagccatgcctgtgtccagacattcagagcagtgga
cgattcttcgccacttcctgtcagcaggacccacagtccctcagtccattctgcatctgc
agggaggggcacactggtgcacactgcgacagatgcagccctggtttctatggcgacctg
ttgttgccaggggccacgtgtgaggaatgtctctgcaacaacaacattgcccccgacgac
cgtgacgcctgtgacagtgtgacaggagagtgtctgcgctgcctccatcacaccaccggc
ccacgctgtgacacctgcaaacctggatactacgggaatgcccaggaccaggactgcaaa
gagtgctcctgtgaccggcgggggacagaggtgactcggtgtcctctggagagtccctgt
ttctgtgattctgtgacaggacagtgtccctgcaggaagggggtagtgggcgtcctttgt
gatgagtgtgaggatggacactggaacctggacggaacgtcgggatgtcaaccctgcagc
tgtgatcccaccaactctttctccaacatgtgcaacaaggtaacgggtcagtgtccatgt
cgtcctgagtttggaggcagacagtgtgatgaatgtggagagaatcattttgggaatcca
gacctgcagtgtatctcttgtgactgtaatgtggagggaaccgagcgtccatcatgtgac
tctgaaaccggagagtgtatctgtcgggtcggcatcacggggatcttctgtgaccagtgc
gccccaggctacgactcggcgttccccgcctgcaagcagtgccacccctgcaccaccctc
tgggcccaaaacgtcactgacgtccagcgagctgcacagaggatgagaaccttcatcccc
cgccttgacaacaagctgcagccgggagacagtcgccagttgcttcagatgctggagatg
cactccaagctggacagcctctccaacctgacgggacactcccccaggaaggtggagaag
atggagaaactgtgcaccatgatcaggaagctgaaagatgcggttgaccctaacatgatc
ctgatcgacctgtctccactggtcaacactgaaatcgacaacattcagatggagttcaag
aagcttctgaacatcctgaaggacaaactcatcgaggacacttacaggaaggaaccggag
ctggtgctggagtcgctggacaagatccagaagcttcataaatccttcatgtctgacgaa
aacagggtcagaatttccagcagagctatagaggactccatggacaccagacaggaagcc
aaactcaaactgaacatgtgcaacggcagaggagagctggagccactggagaaaaaattc
aaagagctcagcattgtcaacctcaaccgaaagatctgtggaggaccaggtctgaaggac
tgttcgggatgtggtggagctttgtgtgacggagtcgttcctgtcagtcagaaagcttca
gaaactgcagagaggacgaagcaggaactcgtcaccctcccatccagactgcaggagtcc
aagaacaagatcgatgatgccaaacaggcagctcaggactccaaagaccaggccaaagac
ctgcaggaccggatcaatgacaacatggactcctttgagagagagaagcagaaaaccaag
gatctgatccaacgagtcaaagactacctgatggatgacatgattcctccagaagacatt
gagaaattggctcgagctgtcctggatatccagctgccacgatcgcctgatcagatccac
tcaatgatcaatgatatcaataaactgatgaccaatgccaccaacttccaggatgacctg
ccgatcctggaggagcatgccaagactgttcaagacctgctgcagaaagctcaagatctc
aaggagcggacaaagaacattaatgtgacagagatcagcagagacatttataaagctgag
aaagctcagagcaaagccaatgacaacctggaaacggccagcaaagacagcgacaagacc
agagacctcgtccagaatattaaagaggaactggacgacaatgagacgaagctgatgagt
ggacgagctgaagatctgcgggatgagattgaagacctgatgaagaaaactgaacagaac
cgaaacatggcgagagacgcccgagacgctgcggactcagctctaaataacactactgac
acacagacagaattgaacgaggtgctgaggctgtttgggctcctaaaggagaagaaaacg
agggtcgaaggtcagagcaacgctggagaacgactgaagatgatcctggacgaagccgcg
gcgatgaagggggacatggaggacaaactgtcccagatacaagatctggagaagaagatt
caggagctgataagaagtaaagaagacaaagcagctgaagtgacgaagctgttagagacg
gtcgattctctgcgccaagagatctccaaacgagccgatggatacaccacctgtacttca
taa
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integrated database retrieval system
