Semicossyphus pulcher (California sheephead): 138612617
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Entry
138612617 CDS
T10596
Symbol
tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spul03036
]
138612617 (tdrd12)
Enzymes [BR:
spul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
138612617 (tdrd12)
Chromosome and associated proteins [BR:
spul03036
]
Eukaryotic type
Gene silencing
piRNA pathway
138612617 (tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
Helicase_C
CS
TSCPD
LEM
Motif
Other DBs
NCBI-GeneID:
138612617
NCBI-ProteinID:
XP_069542079
LinkDB
All DBs
Position
Unknown
AA seq
1415 aa
AA seq
DB search
MVLTISVLKVDNPSCLWGRVVHGPGGYSEMAEKYDLLLAQMNLFYHDVTQDLRKLKPRSI
EEGQVCVVYWPVMKWWCRAVVESIIMDSVSSHVRCLLVDHGERLVVPSHQIRVAEQNFLQ
LPFWVRRFHLAGIRPATLRVPIVEGKAALVSSTRWDSSATLYLHSLLRVSTQTEAVVLGL
ESDSTSVELYLTVGPIKVCVNHDLVVKKFAFFIRESADGSQVDEVDPCPIMLHPDILTQR
NPPWTLFTAAIKPTAQAQPPPGSRRHHELKTCEDGSRSKVTEEQLSPVSQSNSGSDAAAA
ESDSSEETDSSLAAALIQELRLFRFQKFLNPGSSHQQAPAVSQHEELTDCGPEETTAASS
TCTGQEVYAEYLADEETSLSKSVESGGAEKTWRSEEDWACSRLLEWLNPERLSCDPDAAD
NQFVPSDPRRSGILVHSTDPVEPCSSLDDAPVTDTLRRVYQRKLYSLSPADRYSWPAVAR
GCHTFIVSPNADQPLGYLAPLLTHILLNSIFTSLTSSSGPIAVLLCPGWEKVQAVHDLLE
EMKVTQTLHPAVVLLGVGKDEAKDVKIPKKCLLLVTTPFSLVRLLSCHCFLFMRLYHLVL
DEADQLFTLAPDQMATILQHFQKVTCSEQNASCPQQLVAVAKRWTSHMEGFLANHMPYPN
IVMTVPEEVALYGNVQQIILMTLESNKVSVLLSALDFNPDVGQKTLIVANSAQEVEDVFK
ALTTRSAFCLRTHEGLTHQFDFVVQQWRKDIGSGTHIILVTTTECLKCLEIRDATCVVHY
GFPTSPKVFGSRLFCMAENFRNLSERVSSLNQSESSRPLTRSVLLISESNTRHIVGVLRY
LMRTSALLPPELRSFAQGVQVAREDQKINRPLCSHIKSFGVCRHSSACPDRHRFMTQLDR
SALPASGVIEVVPLYIKTASVFCGYIVREEEGGFQSLLSDMTSYYADKKPGAKELLEGSL
YAVQEDELFHRVKILSVPNRGDRLFFSLLVRFIDVGKEEEVKWYQLLQLPEQFQSLPGQA
VEIIVCRVKPVDEETDWHPKVTRAISQKIRGLQHRARAVFSLGNTVFVDRMVRVIQVPGM
KTVINEYNVQSEILNTGMGASNPEHLDLLKALCKESKTHSGKDAGFMSGSGDGLASLEVR
NKAEEEVLAEAFRAAKVSRLTDPPQLEPCETLSPVSPMIQSLVPAPQVPQAPPAAEQNLI
PVCDQTSLLTRPAAAGERNTHAADLKSAEQMMRIGYGRHLCPMTSPASHLNPGGPAGDNQ
NNSQHVVTTNERHCDDSTKSFHPQVRWYQTSHFVTVTVKLMNPESQRCDFHPDRVVYSGR
VNARTYRADLQLHGNIAADRCCWEMKSNEPVLKLVKQQQGHWEHLLRDKNIFVSYDMEHF
EDDEDRTPNGVWFVENTGEDNWYVNPESDSDSDGR
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atggttctgacaatatcagttctgaaggttgataacccatcatgcctctggggccgtgtt
gtccatggtcctggtggttattcagagatggcagagaagtacgaccttctgctcgctcag
atgaaccttttctaccacgacgttactcaagacctgcgcaagctgaagcccaggtcaata
gaggagggacaggtgtgtgtggtgtactggccggtcatgaagtggtggtgtcgggctgtg
gtagagtccatcattatggactcggtgtccagtcatgtccgctgcctcctggtagaccac
ggagaacgactcgtcgtcccctcacaccagatccgagtcgctgagcagaacttcctccag
cttcctttctgggtgaggaggttccacctggcgggaatcagaccagcgacactgcgagtg
cccatcgtcgaggggaaggcagcgctcgtttcatccactcggtgggacagctctgctaca
ctctacctgcacagcctgctgcgagtttctactcagacagaggctgtggtgcttggattg
gagtcagactctacctccgtcgagctctacctcactgtaggacccatcaaggtctgtgtg
aaccacgacctggtggtcaagaagtttgcgtttttcatcagagagtcagcagatggcagc
caagtggacgaggtggatccatgccctatcatgctgcaccctgacatcttaacccagcgc
aaccctccatggaccctctttacagctgcaatcaagcccacagcacaggcacaaccgcct
cctgggtccagaagacatcatgagctgaagacctgtgaggacggcagcaggtcaaaggtc
acagaagaacaactgtctcctgtcagccaatcaaacagcggctcagacgccgctgctgca
gagagtgactcgtcagaggagacagactcgtctctggctgcagctctgattcaagaactc
cgcctgttcaggttccagaagttcctgaatcctggcagcagccaccagcaggctccagct
gtcagtcagcacgaggagctaacggactgtggacctgaagagacgactgcagcctccagc
acctgcacaggacaggaagtgtacgctgaatatcttgcagatgaagaaacaagtttgagt
aaatcagtagagtccggaggagcagagaagacgtggaggagtgaagaggactgggcctgt
tcacgacttttggagtggttgaacccagagcgtctgagctgcgatccagacgctgcagac
aatcagtttgttcccagtgatcccaggaggagtgggattctggttcattccaccgatcca
gtagagccctgctccagcctggatgatgcccccgtcaccgacactctccgccgggtgtac
cagaggaagctgtacagtctgtctccggctgaccgctacagctggccagctgtggctcga
ggatgccacactttcatcgtctcccccaacgctgaccagccgctcggctacctcgccccg
ctcctcacccacatcctgctcaactccatcttcacctccctgacctccagctcaggcccc
atagcggtgctgctgtgtccaggctgggagaaggtccaggccgtgcatgacctgctggag
gagatgaaggtcacacaaaccctccaccctgccgtcgtgctgctcggcgtcggcaaggac
gaggccaaggacgtcaagatccccaaaaaatgccttctgttagtgaccacgcccttcagt
ctggtccgtctgctgtcctgccactgcttcctgttcatgcgtctgtatcacctggtgctg
gacgaggccgaccagctcttcactctcgctcctgaccagatggcgaccatcttgcagcat
ttccagaaggtgacctgcagcgagcagaacgcttcctgtccccagcagcttgttgctgta
gccaaaagatggaccagtcacatggaggggttcttagccaatcacatgccataccccaac
attgtcatgaccgtccctgaggaggtggccctgtatggtaacgttcagcagatcatcctc
atgactctagagagcaataaggtctcagtcctgctgagtgcgttggatttcaaccccgat
gtcggccagaagactctgatcgttgcaaactctgctcaggaggttgaagacgtgttcaag
gctttaaccaccaggtcagcgttctgcctcaggacccacgaggggttaactcaccagttt
gactttgtcgtccagcagtggaggaaagacatcggctccggcactcatattattctggtg
accaccacagagtgtctgaagtgtctggaaatcagagatgccacttgtgtcgtccactac
ggcttccccacttctcccaaagtgttcggcagccgactcttctgtatggcggagaacttc
aggaacctttccgaacgagtttcctccctcaatcagtcagagagcagccgtcctctcacc
aggtcggttctactgatctctgagagcaacacccgtcatatagtcggggttctgcgctac
cttatgcgaaccagcgccctgctgccccctgagcttcggtccttcgcacagggggtccaa
gtggctcgagaggaccagaagataaacaggcctctgtgcagccacataaagagctttggc
gtctgcagacacagcagtgcgtgtcctgaccgacacaggtttatgactcagctggatcgg
tcagcgcttcctgcctctggagtgatagaagttgtgcctctctacatcaagacagcatca
gtcttctgtggctatattgtcagggaggaggagggaggcttccagagcctgctgtctgac
atgacttcttactatgccgacaagaaacctggagccaaggagctgctggagggaagcttg
tacgccgtgcaggaggacgagcttttccacagggtgaagatcctgtctgtccccaacaga
ggcgaccggctctttttcagcctccttgttcgctttattgacgtgggaaaggaggaggag
gtcaaatggtatcagctcctccagctcccggagcagtttcagtctctgccaggtcaggcc
gtggagatcatcgtctgcagagtcaaacccgtcgacgaagagaccgactggcaccccaag
gtcaccagagcgatcagccagaagatccgaggcctgcagcaccgagccagagcagttttc
agtctgggaaacacggtttttgttgatcgcatggtccgtgtgattcaggtgccaggtatg
aaaactgtgatcaatgaatacaacgtgcagtcagagatcctgaacactgggatgggagct
agcaacccggagcatctggacctcctgaaggcgctctgcaaggagagcaagacccacagc
ggcaaggacgcgggcttcatgtctgggtcgggggatggtctcgcatctctggaggtcagg
aacaaagctgaggaggaagttctggctgaagccttcagagcagccaaagtcagtcggctc
actgacccacctcagctcgaaccatgcgagacactgagtccggtgtctccaatgatccag
tccctggtccccgcaccgcaagtaccacaagcaccaccagcagctgaacagaacctgatt
ccagtgtgtgatcagacatccctgctgactcgcccggcagctgctggagagagaaacacc
cacgctgctgatctgaagtcagctgagcagatgatgaggatcggatatgggcgacatctt
tgccccatgaccagcccggcttctcatcttaaccccggtgggcctgccggtgacaatcaa
aacaacagccagcacgtcgtcactacaaatgagagacactgtgatgactccacgaaaagt
ttccaccctcaggtccgctggtaccagacgtcccactttgtgactgtaacggtgaagctg
atgaacccggagagtcagcgctgtgatttccaccccgacagagtcgtctacagtggcaga
gtgaacgctcggacctacagagccgacctgcaacttcatggcaacatcgctgcagaccgc
tgctgctgggaaatgaagtccaacgagccggtcctcaaactggtcaaacaacagcaggga
cactgggaacacctcctcagggacaagaatatttttgtgagttacgacatggagcacttt
gaagacgatgaagacagaaccccaaacggtgtgtggtttgtggagaacacaggagaggat
aactggtacgtgaacccagagagcgacagtgacagcgacggaagataa
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