Semicossyphus pulcher (California sheephead): 138612922
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Entry
138612922 CDS
T10596
Symbol
nup160
Name
(RefSeq) nuclear pore complex protein Nup160
KO
K14303
nuclear pore complex protein Nup160
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138612922 (nup160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spul03019
]
138612922 (nup160)
03036 Chromosome and associated proteins [BR:
spul03036
]
138612922 (nup160)
Messenger RNA biogenesis [BR:
spul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138612922 (nup160)
Chromosome and associated proteins [BR:
spul03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
138612922 (nup160)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NUP160_120_M
Beta-prop_Nup120_160
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
TPR_1
TPR_2
Motif
Other DBs
NCBI-GeneID:
138612922
NCBI-ProteinID:
XP_069542549
LinkDB
All DBs
Position
Unknown
AA seq
1397 aa
AA seq
DB search
MRKEKMAASLERSFIEICGFERETVSRFREVTVNLGVSALPGGSKFPESAGAFHYEESGK
LLSVTSNRFIYWSTSGDTVQLVEQSLDTNLLNNAVKLKFTHCTVLPGGVAIHETLNNVII
LVCTNQSVHRLVLPHPSRMYRSELVTELHMQSVFTDVGKLSLQDAAHSAIIPGSAGQTGS
PSTSTAWLSQSGEAHYAVAPPAGGIMVVTLPPHDSPGPVCVLELRRSSMMQRLSGWMPSA
MRGDQSPADLVLSLAVKELEEDSFVFALCQDHRLRMWSFREQACLLEADMLDYMPACRGV
KRLSGQGHRLRLAFSASTGLSVCVYLSVPHRGQFTLLQLVATDNQRYSLDHISSLFSSQE
TLVDFAVTSSDVWAVWVDESNSSVVKYINFEHNTAGQWNQVFVQPPPEEEIHIGVDQDPR
ETYLEVLFSPLRFTASAIIKALQIFRRGSERISDVSWESLKKEVTLAVENELQSSVTEFE
FSQEEYRQLQVEFWSRFYSCCLQYQEVQSEPLSVTVNQNTGLVCLLRKGFVSFLLPCFAV
DHLYLSYDEYLFSEEDTPLTEDPELGRDVLQLVQCLRVVSDAVSGEMAYEMEKALEHLQS
PERAAELVLETLLSNDNESVIEDVQNKLQDIRNPMAAMMVLLRELDLETDSEPGPEGPLT
PGHSLNVRISLSQLFGSSSAVSVVCQAVCHMTMTRALFCRDLLILQKLYLRFGDNVFLGG
GAQLLQLQQDLIPRSSHLLSSYHLLKHISQSIASSVPVDILDANLQHLTVLELSDSPALS
SNRSVLSPQTVVELFYQTAARKMMVSQIFSQQQSDSPLHWSHMTSSLVHLLAQLLWPNNP
GFQFPECLMANCQYTQLQEYVRLIGPWCQVNVGSRRFMLGQCYLANGEGQKALQCFQEAA
TEVEKEEFLMRLTGSEEDEAASTPRLQYYNKVLRLLEDVGLPELVIQLASLAITEAANDV
NSQAALWTRIFKHHLDLGHNSEAYEALTQNPDCSMQLDCLRQLVVVLCERSQLQDLVQFP
YVNLHDEVVSIIESRARGLDLLAHNYYELLYAFHINRHNYRKAGTVMFEFGMRLGREVRT
RLGLQKQVNCYLAALNCLRLIRPEYAWIVQPTSGAVYERPGASPKRNSDGEFSTEPVRRQ
VDILELKDLEKEYILSRSRLTLAQYHPPSAAIAGSASAMEMVALLVQTGLFDSALSVCQT
FKLNLTSVFEGLTFKCIKLQFGGEESQNEAWSWLAANQLSSVVNTKESSATDEAWRLLAS
YLDRFPSSNGRHHHCVINKLLSHGVPLPDWLLKSYKAVDAACLLRLFLNFDLLDAAAELV
LEYVDALLGRGHQYFGIERPLSATSSSVWLPYTSIDQLLQTLNETQTNSSIYNKVRDKLD
DYHKLVEQTTKRRLIAR
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaggagaagatggcggcgtcgttggagcgcagcttcatagagatctgtggattt
gagagggaaactgtgtcccggttcagagaagtgacagtaaacctgggcgtctctgctctt
cccggggggtcgaagtttccggagtctgccggagcatttcattatgaggagagcgggaag
ctgctgtctgtcaccagtaacaggttcatttactggtccacgtcaggagacacggtgcag
ctggtggagcagtctctggacaccaatctactcaacaatgctgtcaaactcaagttcaca
cactgtacagtgctgccggggggtgtggccatccatgagaccctcaacaatgtcatcatc
ctcgtctgcaccaatcagagcgtccacaggctggtgctgccccacccctcacgcatgtac
cgcagcgagctggtgacggagctgcacatgcagtcggtgttcactgacgtggggaagctg
agtctgcaggatgccgctcacagcgccatcatccctggatcagcgggtcagacaggaagt
cccagcacgtccaccgcctggctaagtcagtccggagaggctcattacgctgtggctccc
cctgctggaggcatcatggtggtgaccctgcccccccacgactcccccggccctgtgtgt
gtgctggagctgaggaggagctccatgatgcagcggctgtcgggctggatgccgtcagct
atgcggggtgatcagagtccggccgacctggtgctcagcctggctgtgaaggagctggag
gaggactccttcgtcttcgctctctgtcaggaccaccggctgcgcatgtggtctttcagg
gagcaggcgtgtctgctggaggctgacatgttggactacatgccggcctgcagaggtgtg
aagcgtctgtcaggtcagggtcaccgcctcaggttggccttctctgcctccaccggcctc
agcgtgtgtgtttacctgagcgtacctcacagaggacagttcaccctgctgcagctcgtc
gccacggacaaccagcgctacagcctggaccacatctcctccctgttcagctctcaggag
actctggtggactttgctgtgacctcctcagacgtctgggctgtgtgggtggacgagtca
aactcctctgtggtcaaatacatcaactttgaacataacacagcgggtcagtggaaccag
gtgtttgttcagcctccacctgaagaagagatacatataggagtggaccaggaccccaga
gagacgtacttggaggttctcttctctcctcttcgcttcacagcttcagccatcatcaaa
gctctccagatctttcgcagaggctcagagaggatctctgacgtttcctgggagagtctg
aagaaggaggtgactctggctgtggagaacgagctgcagagcagtgtgacagagtttgag
ttttctcaggaggagtaccgtcagctgcaggtggagttctggtccaggttttactcctgc
tgtcttcaatatcaggaggtgcagtctgagcctctgagtgtgaccgtgaaccagaacaca
ggcctggtgtgcctgctgaggaagggcttcgtgtcgttcctgctgccgtgtttcgctgtg
gatcacctgtacctttcctatgatgagtacctgttctcagaggaggacacgcccctaact
gaagaccctgagctggggcgggacgtgctgcagctggtgcagtgtctgcgtgtggtcagt
gatgcagtctctggagagatggcgtatgagatggagaaagctctggaacacctgcagtca
cctgagagggcagcagagctcgtcctggaaaccctgctgtccaatgacaatgaaagcgtg
attgaggacgtccagaacaagcttcaggacatcaggaacccaatggcagccatgatggtt
ctgttgagggaactagacctggagacggactctgagcccggaccagaggggcccctcaca
cctggtcacagtctgaatgtgaggatcagcctgtctcagctgttcggcagcagctcggcc
gtctctgtcgtctgtcaggctgtctgtcacatgaccatgaccagagctctgttctgtaga
gacctcctgatcctgcagaaactctacctgcgcttcggagacaacgtgttcttgggcgga
ggggctcaactgctgcagctacagcaggacttgattcctcgcagctctcacctgctctcc
tcctatcacctcctcaaacacatcagtcagagcatcgcctcctctgtgcctgtcgacatc
ctagatgctaacctgcagcacctcaccgtgttggagctgtctgactctccggctctctcc
tccaacagatcagtgctgagtcctcagacagtggtggagctcttttatcagacagcagca
aggaagatgatggtgtctcagatcttctctcagcagcagagcgactctccgctccactgg
agtcacatgacctccagcctggtccacctgctggctcagctgctttggcccaataatcct
ggtttccagttcccagagtgtctcatggcaaactgtcagtacactcagctgcaggagtac
gtgaggctgattggtccctggtgtcaggtgaacgtgggctcccgtcgctttatgttgggt
cagtgttacctggccaacggagagggacaaaaggctctgcagtgtttccaggaggcggct
acggaggtggagaaggaggagttcctaatgagactgacgggcagcgaggaagacgaggct
gcatccaccccccgactacagtactacaacaaggtgctccggctgttggaggatgtgggt
ctacctgagctcgtcatccagctggcctctctcgccataacagaggccgccaacgatgtc
aacagtcaggcggctctgtggaccaggatattcaaacatcatctggacctgggacacaac
agtgaagcttatgaagcgctcacacagaacccagactgcagcatgcagctggattgtctc
cgtcagctggtggtggtcctgtgtgagcgctctcagctccaggatttagtccagttccct
tacgtcaacctgcacgacgaggtcgtcagtatcatcgagtcccgggccagaggtttggac
ctgctggctcataattactatgagctgctgtacgccttccacatcaaccgacacaactac
aggaaagcgggcacggtgatgtttgagttcgggatgcgtctgggtcgggaggtccggact
cgtctgggtctacagaaacaggtgaactgttacctggctgctctcaactgtctacgcctc
atcagacccgagtacgcctggatcgtccagcccacctctggagctgtgtacgagcgtcca
ggtgcgtctccaaagaggaactctgatggagagttttctactgaaccagtcagacgtcag
gttgacatcctggagcttaaagacctggagaaggagtacatcctgtcccgcagccgcctc
acgctggcccagtatcacccaccctctgccgccatcgcaggcagtgcgtcagccatggag
atggtggccttattggtccaaacaggactgtttgactcggctctttccgtctgtcagacc
ttcaaactgaatctgacgtctgtgtttgaggggcttacctttaagtgtattaagctgcag
tttggaggggaagagtctcagaatgaagcctggagctggttggctgctaatcagctgtca
tcagttgtcaacaccaaagagtccagtgcaacagacgaggcgtggcggctgctggcttcg
tacctagacaggtttccctcctccaatggacgacatcatcactgtgtcatcaacaagctg
ctgtcacacggtgtccctctgcccgattggctgctgaagtcctacaaggcggtggatgca
gcgtgtctcctgcgtctcttcctgaactttgaccttctggatgctgcagccgagctggtg
ctggagtacgtggacgctctgctgggacgaggacaccagtactttggaatagagaggcct
ctgtcagccacctcgtcttcagtctggctgccatacacttccatcgatcagctgctgcag
acgctgaacgagactcagaccaacagcagcatttataataaagttcgggacaaactggac
gattatcacaaactggtggagcagacgaccaagcgacgactcattgctcgataa
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