Semicossyphus pulcher (California sheephead): 138612993
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Entry
138612993 CDS
T10596
Symbol
ddx1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spul03041
]
138612993 (ddx1)
03016 Transfer RNA biogenesis [BR:
spul03016
]
138612993 (ddx1)
Enzymes [BR:
spul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138612993 (ddx1)
Spliceosome [BR:
spul03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
138612993 (ddx1)
Transfer RNA biogenesis [BR:
spul03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
138612993 (ddx1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
138612993
NCBI-ProteinID:
XP_069542651
LinkDB
All DBs
Position
Unknown
AA seq
741 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKGKGRASIKTGGAIFNNWQMNPYDRSNAFAIGPDGLCCQSREFKEW
HGCRSTKGVTKGKYYYEVTCHDQGLCRIGWSTSQAALDLGTDKFGFGFGGTGKKSNNKQF
DSYGEEFTMHDTIGCYLDQDKGQISFSKNGNDLGVAFEIPQHVKNQPFFASCVLKNAELK
FNFGGEAFKNPPKSGFVALDQATDGHVVKSSQTGSAKVSQVKAVSNAPKALIIEPSKELA
EQTLNNVKQFRKYVDNPKLRDLLVIGGVAAKDQLAALEQGIDIVVGTPGRLDDLISTGKL
SLSQVRFLVLDECDGLLSAGYTDFINRIHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLS
ERIMHFPTWVDLKGEDSVPETVHHVVVPVNPKNDRLWERLGKNHIRTDEVHAKDNTRPGA
NSSEMWSEAIKVLKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDSKNHQ
LSCVCLHGDRKPNERKNNLDRFKKKEVRLLICTDVAARGIDIHGVPYVINVTLPDEKQNY
VHRIGRVGRAERMGLAISLVAMEKEKVWYHVCANRGRGCYNTRLKEDGGCTIWYNEKELL
SDIEEHLKCTITQCEPDLKIPVDDFDGKVTYGQRKALGGGNYKGHVDVLAPTVQELASLE
REAQSSFLHLGYMPNQLFRAF
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgttttctgaaatgggggttatgcctgaaatcgctcaggctgtggaagaaatg
gactggctgctacccactgacatccaggctgagtctattcctcttattcttggtggtgga
gatgtactcatggcagcagaaactggtagcggtaaaacaggtgccttcagtattcctgtg
atccagatcgtttatgagaccctgaaggatcagcaggagggcaagggcaagggcagagcc
tccatcaagactggtggagcaattttcaacaactggcagatgaatccttatgaccgcagc
aacgcctttgcaattggtccggatgggttgtgctgccagagcagggagtttaaagagtgg
cacggctgccgctctactaaaggtgtcaccaaagggaagtactactatgaggtgacctgc
catgaccagggtctgtgtcgcattggctggtccaccagtcaggcagcgctggacttggga
actgataagtttggttttggtttcggtgggactggaaagaaatccaacaacaagcagttt
gacagctatggagaggagttcaccatgcacgacactatcggatgctacctggatcaggac
aagggccaaatttccttctccaaaaatggtaatgacctgggtgtggcttttgagatccca
caacatgtgaagaatcaacccttctttgcctcttgtgtccttaagaatgcagagctgaag
ttcaactttggaggagaagcctttaaaaaccccccgaagagtgggtttgttgctctggat
caggcgacagacggtcacgtggtcaaatcttctcagacaggcagtgccaaagtgagtcag
gtgaaagcagtttccaacgcacccaaagctctgatcatcgagccatctaaagaactggct
gaacaaaccctcaacaacgtcaagcaattcaggaagtatgtggataaccccaaactgagg
gatctactggtgatcggtggcgtggctgccaaagatcagctggctgctctggaacagggg
attgacattgtggtgggaacaccgggcagactggatgacctcatatccactgggaaactg
agtctgtcccaagtccgctttctagtcctggatgagtgtgacggccttctgtctgcaggc
tataccgactttatcaacaggatccataaccaaatccctcaggtcacttctgacggcaaa
agactgcaggtgattgtttgttcggccacactgcattcgttcgacgtgaagaagctgtct
gagcgtatcatgcactttcccacatgggtggacctgaagggggaggactctgttcctgag
accgtgcaccacgtggtcgtgcctgtcaatcccaagaacgatcgcctgtgggagcgtctg
ggcaagaaccacatccggactgatgaagtccacgccaaagacaacaccagacctggagcc
aattcttcagaaatgtggtcagaagccatcaaggtgctgaagggcgagtacacggtgagg
gccatcaaagagcacaagatggaccaggccataatcttctgccgcaccaagatcgactgt
gacaacatggagcagtacttcattcagcaaggaggaggtccggacagtaaaaaccaccag
ctgtcctgtgtttgtctccacggtgatcgcaagcccaacgagcggaaaaacaacctggac
cgcttcaagaagaaagaagtgaggctgttgatctgcacggacgtggctgccagaggaatc
gacatccacggagttccttacgtgatcaacgtcaccctgccggatgagaagcaaaactac
gtgcatcgtatcggcagagttggaagagctgagaggatgggactggctatctccttggtg
gccatggagaaagagaaggtgtggtaccatgtttgcgcgaaccgaggcagaggctgctac
aacacccggctgaaggaggacggaggatgcaccatctggtacaacgagaaagagctcctg
tcagatattgaggagcatctaaagtgcaccatcacccagtgtgagccagacttaaaaata
cctgtggatgactttgatggaaaggtcacctacggccagcgcaaggcattgggaggtggt
aactacaagggccatgtggatgtcctggccccgactgtccaggagctggcaagccttgag
agagaagctcaaagttccttcctccacctgggatacatgccaaaccagcttttcagagcc
ttctga
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