Semicossyphus pulcher (California sheephead): 138613145
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Entry
138613145 CDS
T10596
Symbol
smc1b
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04110
Cell cycle
spul04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
138613145 (smc1b)
04114 Oocyte meiosis
138613145 (smc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spul03036
]
138613145 (smc1b)
Chromosome and associated proteins [BR:
spul03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
138613145 (smc1b)
Meiosis-specific proteins
Cohesin complex and associated proteins
138613145 (smc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
AAA_23
ArlS_N
AAA_13
Motif
Other DBs
NCBI-GeneID:
138613145
NCBI-ProteinID:
XP_069542851
LinkDB
All DBs
Position
Unknown
AA seq
1232 aa
AA seq
DB search
MVYLKEIDVANFKSWKGKQVIGPFMRFNCIIGTNGSGKSNVMDALSFAMGEPAASLRVKH
LRDVIHGAHIGQPVANTARVAMRYCDDEDQETVFCRSILGDSSEYRINGQHVSLAKYLEE
LEKIGIVTKARNCLVFQGAVESIALKDPKERTKMLESISQSNEFTAEYNKKKEALLKARE
DTQFHFNKKKSTSIEWKQVSQEKMEAQRYQTLVDELYQNRLQLSLAELYHNEKGISALSH
VLRVKQQAAAVKNSQLLNAESTVKTCKKEHGRLSREQQHTEKEIRAQEHIQSQCCSQNVK
AKVNTSHHMKKAEEVRDALRKSQKLMAIKEQELAEGRQEIAELEMTWRSYEKQAQEKGAS
RGRDIDLDEDQLERYKELKELARKQGAVFSQQAEKLHWEVRADYERMAFDQCRKKEVEAT
IRSHQTQLEDLTRRAEMLEEYNKTCKSSLEEYHQQEESLSAELQRGHQRRAEVNQELGQV
LEELGNARLEGQESRRQLQRKELLERLHRLYPETVYGRLSDLCSPIHKKYQLAVAKVFGH
HMNSIVVATEKVARDCIHFLKAERLEPETFLPIDYLEVSPLNERLREVPGAKMLVDVVQV
NPSAGAAHLRRVVQFVCGNTLVCENIKEARTVAFDRQERLKTVSLDGTLFAKSGIISGGS
RELRNKAHCWEEKDIKQLMERKHRLTAELRDLMRLQRKESDLKQIVAQSQGVQTRLKYTK
AELENLRKKNILKCQVEISRMESELANLDSQIQMQQESVEGKEAEMRNIRNQIHQMEDLV
FSDFCPEIGVESIREYEQEHLKQQTELDKKRLEFESQCTRLYAQLEYEQEQLNQQKKKLL
KMEEALDQERKIIAGQRKDEGKLLAAVEESQNKLLELKNQLLTKKSQVSAAKAELDQKTQ
SLQAINKQLVELQREVMSAESALEQKRLARHNLLLACKIQSLPITLLSGSLNEISEVQMD
TESESTSATMDIYEREALLVIDYSGLGMDLRSLQAEEEVEPYLERMKESVSSTEGMLLRT
PAPNLKAMEKMREVKDKLLGVTEEFDASTRAVRKCSQEFEQVKAQRFQLFSQCFEHVSVV
IDQIYKRICTNSSAQAILSAENPDEPYLGGINYSCVAPGKRFMSMDNLSGGEKAIAALAL
LFAIHSFRPAPFFVLDEVDAALDNTNINKVTGFIREESRKNMQIIVISQKEEFFSKADAL
LGVYSDFDECIFSRILTLDLQSYPLGEEDNGT
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atggtctatctaaaagaaatagatgtcgcaaacttcaagtcatggaaaggaaaacaagtc
atcggtccgtttatgcgatttaattgtataattggcacaaacggctctggcaagtccaac
gtgatggacgccctgagctttgccatgggtgaacccgctgcctctctccgggtgaagcac
ctcagggacgtgatacacggagcccacatagggcagccggtggccaacaccgcccgcgtc
gccatgcggtactgcgacgatgaagaccaggagacggtcttctgcaggagcatcttaggt
gactcctctgagtatcgtattaatggtcaacatgtcagtctggccaaatacctggaggag
ctggagaagattggcattgtgaccaaagctcgaaactgtttggtgttccagggggcagtg
gagtccatagcactgaaggacccaaaagagaggaccaaaatgttggagtccatcagtcag
tcgaacgaatttactgcagagtacaacaagaagaaagaggctctgctgaaggccagagag
gacacacagtttcacttcaacaagaagaaatccactagcattgagtggaaacaagtgtcc
caggaaaaaatggaggctcagaggtaccagacactggtggatgaactctaccaaaaccgc
ctgcagctaagcctggctgagctctaccataatgagaagggcatcagcgccctaagccac
gtcctgagggtgaaacagcaggctgcagctgtcaagaacagtcaactgttgaacgcagag
agcacggtcaagacttgcaagaaggaacatggacgcctcagcagagagcagcagcacaca
gagaaggagatccgtgcccaggagcatattcagtcccagtgttgctcccagaacgtcaaa
gccaaagtgaacacctcccatcacatgaagaaggctgaggaggtccgtgatgccctgagg
aagagtcagaagctgatggcaattaaagagcaggagctggcagagggacggcaggagatc
gctgaactggagatgacctggaggagctacgagaagcaggcgcaggagaaaggagcctcc
cgagggagagacatcgacctggatgaggatcagctggagcgatacaaagagctgaaggag
ctggcgagaaagcagggcgctgtgttcagccagcaggcagagaagctgcactgggaggtg
agagcggactacgaaaggatggccttcgaccagtgcagaaagaaggaagtggaggccacc
atcaggagccaccagactcagctggaagatttgacacgcagggcagagatgctagaggag
tacaacaagacctgcaagtcttcccttgaagagtatcatcagcaggaggagagcctgagt
gctgagctgcaacggggccaccagcgccgagcagaggtgaaccaggagctgggccaggtg
ctggaggagcttgggaatgcccgtctggaaggccaggagagcagacgccagctgcagcgc
aaagagctgctagagaggctccacagactctaccctgaaactgtgtacggccgcctgtct
gacctgtgcagccccatccataagaagtaccagctggctgtcgccaaggtgttcggccat
cacatgaactccattgttgtggccacagagaaggtggcacgtgactgtatccatttcctc
aaggcggagcgattggaacccgagaccttcctgcccatcgactacttggaggtaagccct
ctgaatgagcgtctgagggaggtgcccggcgccaagatgctggtggatgtggtacaggtt
aacccctccgcaggtgctgcacacctgagaagggtggtgcagtttgtctgtggcaacacg
ttggtgtgtgagaacatcaaagaagcaaggactgtggcctttgacaggcaggagcgctta
aagacagtgtctctggacgggacactgtttgcaaagtccggcatcatctctggaggctcc
agggaactgcggaacaaagctcattgctgggaggagaaggacataaagcagctgatggaa
cgcaaacaccggctgaccgcagagttacgcgatttgatgaggctgcagcggaaggagtca
gacctgaaacagattgttgctcagtctcagggtgttcagacgcgcctcaagtacaccaaa
gctgagctggaaaaccttcgaaagaaaaacatccttaaatgccaggtggagatttctcgt
atggagagtgaactagcaaacctggactctcagatccagatgcagcaggagagtgtggaa
gggaaggaagcagagatgaggaatatcagaaaccagatccaccagatggaggacttggtg
ttttctgacttctgtcccgagatcggtgtggaaagcatcagagagtacgagcaggagcac
ctgaaacagcagacggagctggacaagaagcgactggagtttgagagtcagtgcactcgc
ttgtatgctcagctggagtacgaacaagaacaactgaaccagcagaagaagaagcttctc
aaaatggaggaagccctcgaccaggagcggaaaataatcgctgggcagcggaaggatgag
gggaagcttctggcggcggtggaggagagtcagaacaagctgctggagctgaagaaccag
ctgctgactaagaagagtcaggtgtctgctgccaaagctgagctggaccagaaaacgcag
agcctccaagctatcaacaaacagttggtggagctccagcgggaggtgatgtcagcagag
tcggccctggagcagaaacgcctggccagacacaacctactgctggcctgcaagatccag
agcctgcccatcactctgctgtccgggagcctgaatgagatcagtgaggtgcagatggac
acagaatctgagagcacttcagccaccatggacatctatgagagagaagcactactagtc
atcgactactcaggcctggggatggatctcaggagtctgcaggcagaggaggaggtggag
ccctacttggagaggatgaaggagtcggtgtcctccacagaggggatgctacttcgcact
cctgcacccaacctgaaagctatggagaagatgagggaggtgaaggacaagttactggga
gtgacagaagagtttgatgccagcaccagagcagtcaggaaatgcagtcaggagttcgag
caagtgaaagcccagcgcttccaactcttcagccagtgctttgaacacgtgtctgtcgtc
atcgatcagatctataaaagaatatgcacaaacagcagcgctcaggctattctgagtgcg
gagaatccagacgagccgtacctcggtggtattaactacagctgtgtggcgccggggaaa
cgcttcatgtccatggacaatctgtctggtggagagaaggccatcgctgccctggccctg
ctgtttgccatccacagcttccgccctgcgcccttcttcgtcttggacgaggtggatgca
gccctggataacactaacatcaacaaggtgacaggtttcatcagagaggagtccaggaag
aacatgcagatcatcgtcatatcccagaaggaagagtttttctcaaaggctgacgcttta
ctgggagtctactcagactttgatgaatgcatcttcagtcgtattctgacactcgacctg
cagtcttaccctctgggtgaagaggacaatgggacatag
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