Semicossyphus pulcher (California sheephead): 138613214
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Entry
138613214 CDS
T10596
Name
(RefSeq) aggrecan core protein-like
KO
K06792
aggrecan 1
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
spul00535
]
138613214
00536 Glycosaminoglycan binding proteins [BR:
spul00536
]
138613214
04091 Lectins [BR:
spul04091
]
138613214
Proteoglycans [BR:
spul00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
138613214
Glycosaminoglycan binding proteins [BR:
spul00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
138613214
Lectins [BR:
spul04091
]
C-Type lectins
Lecticans
138613214
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
EGF
Ig_3
I-set
UL45
ig
Ig_CD22
Motif
Other DBs
NCBI-GeneID:
138613214
NCBI-ProteinID:
XP_069542935
LinkDB
All DBs
Position
Unknown
AA seq
1313 aa
AA seq
DB search
MTALLLLCVSLPLISATVLLEDHDDLDGTLRVSIPKEMPLRPLLGSQVVVPCYFQDNTVN
DPGAPTIAPLSHRIKWSYVTKEKVTTILVASEGKVQVETEYLDRVTMINYPLVPTDATLE
ITELRSKDSGTYRCEVMHGIEDNYDTVDIQVQGIVFHYRAISTRYTLTFEKAKAACIQNS
ATIATPAQLQAAYDDGYHQCDAGWLSDQTVRYPIQEPRERCYGDKETFPGVRTYGVRDAN
ETYDVYCFAEKMSGRVFYSMSVEKFTFYEAGDQCAKLGARLASTGELYLAWQAGMDVCNA
GWLGDRSVRYPINIARPQCGGGLLGVRTIYLFPNQTGYPYPDSRYDAICFQAGEYEGSVP
VKTTPFPDIIPMTPASGVYPGLIPTSGVKEIKSGEVGTLSPLPVPPSVTDTYTKVTPVVL
EPGLGLTDIYAAMGPTGVVFHYRPITGRYTLTFLEAARACQSIGAAIASPQQLHAAFEKG
LHQCDAGWLRDQTVRYPIVSPRDNCAGNLPHLPGVRSYGLRPASERYDVFCYVERLQGEV
FFTSDYDSFSYEEAVQHCQKLNTTLANTGQLYAAWNQGLDKCRPGWLMDRSVRYPITTPR
SHCGGGQVGVHIIYAYPNQTGFPDEHSRYDAYCFKAESSVVHVDTETRVNVTTVTVDVID
KTTVTIDLLAPTVETTVHYNETVPGENITEIEEFINETTITIHQAVPTAKTILPPIHVDV
SGSGSADGSADGSASGEISIESSTSSASGDASGSGEQVIFSGRTDIFSGDQSASGGPQEA
EGEGSVIFTSGEQGSASGSGESLDRQHSGFSESGSSYTSGSGDISSSSGETMIIMVDGKT
VDVTRPHQKSIEQELGQGGIDSSGDLESSMSGSVDMSGTGSGGFSGISFIDHSAVDLTVQ
PSGEQEVSGYRPFHSGFPSGFPSGVSSSGSASGDSFQLRGDVIYLTDIDMMEVTVPPQVS
HPQEVSGEGSGSGIHHEISGTLDQRLHLSGSGDQVTYTEYIPSVGQSGHSQESQEERAGP
TDYVVTPDSAYTSPTTAPSVSLATPAVVEQPEVVDATADPCDPNPCRSGSCTVQGELAVC
QCPAGFTGEDCSTRVQGCADGWMEFMGSCYLHFAERDTWSEAEQRCQELNSHLVSIGSQE
EQQFVNSNGQDYQWIGLNDKDVQNEFRWTDGSPLTFENWRPNQPDNYFNSGEDCVVMIWH
EGGQWNDVPCNYHLPFTCKTGPVMCRAPPEVEHGRPMGSTRERYPVDSIVRYQCDAGYTQ
RHLPVIRCMPDGQWEEPQVECTEAGANSNRLHKRSLRRRSKGVSSQQEQRKLL
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccctgcttctgctttgtgtgtccttgcccctcatctcagcaacagtattgctt
gaagaccatgacgacttggatggcacattgcgtgtcagcattccaaaggagatgcctctc
cgtcctctgctcggcagccaggtagtggtaccatgctacttccaggacaacacggtgaat
gaccccggagccccaacaatcgccccgctctcccaccgtatcaaatggtcgtacgtcacc
aaggagaaagtcaccaccatcctggtggcatcagagggaaaagtccaggtggagactgag
tatttggacagagtgacgatgatcaactacccgctggtgcccactgatgccaccctggaa
ataacagagctcaggtccaaagattcaggcacctaccgctgcgaggtgatgcacggcatt
gaggacaactacgacactgtggacatccaggttcagggtattgtcttccattaccgagcc
atctccacccgctacaccctgacctttgagaaagctaaggcagcctgcatccagaacagt
gccaccattgccaccccagcccagctccaggctgcttacgatgatggataccaccagtgt
gatgctggatggctctctgatcagactgttaggtacccaatccaggagcctcgtgagcgc
tgctatggagacaaggagaccttccctggcgtgagaacctatggcgtgagagatgccaac
gagacttacgatgtctactgttttgctgagaagatgtcaggcagagtcttctactccatg
tctgtagagaagtttaccttctatgaggcaggcgatcagtgtgccaaacttggtgcccgt
ctggcttccactggagaactctacctcgcctggcaggctggaatggatgtgtgtaacgct
ggctggctaggagacaggagtgttcgttaccccatcaacatcgccaggcctcagtgtgga
ggggggctccttggagtgagaaccatctacctgttccccaaccagacaggatacccctac
ccagattcccgctatgatgccatctgcttccaagctggtgagtatgaaggttctgtgcct
gtgaagaccacccctttcccagacattattcccatgacacccgcctctggagtataccca
ggtctcatccccacttctggtgttaaagagatcaaaagtggtgaagttggcaccctgtca
cctctgcctgtcccaccaagcgtgacagacacatacaccaaagtgactcctgttgtactt
gagcctggacttggtctgacagacatatatgctgccatgggtcccacaggagtggtgttc
cactaccgacccatcaccggtcgctacacactgacctttctggaggctgccagagcctgc
cagagtattggggcagccattgccagccctcagcagctgcacgcagcctttgagaaaggc
ctgcatcaatgtgatgctggttggctccgtgaccagacagtcagatatcccatcgtgtca
cccagagacaactgtgctggtaatctgccccacctcccaggagtcagatcctatggcctg
aggccagctagcgaacgttatgatgtattttgttacgtggaacgcctgcaaggtgaggtc
ttctttaccagtgactacgacagcttctcctatgaggaggctgtgcagcattgtcagaaa
ctcaataccaccctggccaacactgggcagctctatgctgcctggaaccaaggacttgat
aagtgccgtccaggctggttgatggaccgcagtgtacgctaccccatcacaactcccagg
tcccactgtggaggtggtcaagttggggtccacattatctacgcctacccgaaccagaca
ggatttcctgatgaacactcacgctacgacgcttattgttttaaagctgaaagttctgtt
gtacatgtcgacacagaaaccagagtgaatgtgaccacagtgacggtggacgttattgac
aagacaacagtcacaattgatctcttggctcccacagttgaaacaactgtgcactacaat
gaaactgtacctggtgaaaatataactgaaatagaggagtttatcaacgagacgaccatc
acaattcaccaagctgtccctactgcgaaaacaattttacctccaatccatgttgatgtg
tcgggctctggttcagcggacggttcagcggatggttcagccagcggggagatctcaata
gagtccagtacctccagtgccagtggagacgcctctggatcaggagagcaagtcattttc
agcggacgcactgacatcttctctggagatcagtctgcttctggagggccacaggaggca
gaaggggaaggctctgtcatctttacatctggagaacagggtagtgcatctggatctggg
gagtcgctggacaggcaacactctggcttcagtgaatccggatccagttataccagtgga
agtggggacatcagtagtagcagtggagaaacaatgataatcatggtggatgggaagacg
gtggatgttaccagacctcaccaaaaatccattgagcaggagttgggccagggaggcatt
gattccagtggagacttagaatcaagcatgtcaggatcagtagatatgtccgggactggc
tctggtggattttctggcatctcatttatagaccacagtgctgttgacctgaccgtccaa
ccatctggtgaacaggaggtgtctggatatcgccccttccacagtggctttccaagtggt
tttccatctggtgtctcgagcagcggctctgcctctggggactctttccagctgcggggt
gatgtgatctacctaacagacattgatatgatggaagtgaccgttccaccacaggtgagc
caccctcaggaggttagtggagagggaagcgggtcagggatccatcatgaaattagcggc
actttggaccaaagattgcatctgtcaggaagtggagaccaggtgacctacactgaatac
attcccagtgttggccaatcaggacacagccaggagagtcaggaagagcgtgctggacct
acagattatgttgtgacccccgactcagcctacaccagcccaaccacagcaccgtcggtg
tcattagcaacccctgctgttgttgagcaacctgaagtagtggatgccactgcagacccc
tgcgatccaaacccttgcagatcaggatcctgcactgtgcagggagaactcgctgtgtgt
cagtgtcctgctggtttcactggtgaagactgctccacacgtgttcagggctgtgccgat
ggctggatggagtttatgggcagctgttacctccactttgcagagagagacacctggtct
gaggccgagcaacgctgtcaggagcttaactcccacctggtcagcattggctctcaggag
gagcagcagtttgtcaactccaatggtcaagactaccagtggattggacttaacgacaaa
gatgtgcagaatgagttccgctggacagacggcagtcctctgacatttgagaactggagg
cccaaccagcctgataactacttcaactctggggaggattgtgtggtgatgatctggcat
gaaggtggacagtggaatgacgtgccctgcaactaccaccttcccttcacctgcaagact
ggtcctgtcatgtgcagagcaccccctgaggtggaacatggccgtccgatgggcagcacc
agagagcgataccccgtcgactctatagtccgctaccagtgtgatgcaggctacacacag
cgccacctgcctgtcatacgctgtatgccagacggacagtgggaggagccacaagtagag
tgtacagaagccggcgccaacagtaacaggctacacaaaagatccctgaggaggagaagt
aaaggtgtcagcagccaacaggaacagaggaaactgctctga
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