Semicossyphus pulcher (California sheephead): 138613259
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Entry
138613259 CDS
T10596
Symbol
sf3b3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138613259 (sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spul03021
]
138613259 (sf3b3)
03041 Spliceosome [BR:
spul03041
]
138613259 (sf3b3)
03036 Chromosome and associated proteins [BR:
spul03036
]
138613259 (sf3b3)
Transcription machinery [BR:
spul03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
138613259 (sf3b3)
Spliceosome [BR:
spul03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
138613259 (sf3b3)
Complex B
138613259 (sf3b3)
Complex C
U2 SnRNP specific factors
138613259 (sf3b3)
Chromosome and associated proteins [BR:
spul03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
138613259 (sf3b3)
TFTC complex
138613259 (sf3b3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
138613259
NCBI-ProteinID:
XP_069542991
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MFLYNITLQRATGITHAIHGNFSGTKMQEIVVSRGKILELLRPDANTGKVHTLLTVEVFG
IVRSLMAFRLTGGTKDYIVVGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKVTLETDEEMVTEIRLKYFDTIPVATAMCVLKTGFLFVSSEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT
PQLYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKQDELGEKGTI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPEAIFGAPKAGAGQWASLVRLVNPIQGATLDQVQLEQNEAAFSVAVCRFPNTG
DDWYVLVGVARDMILNPRSVGGGFIYTYRLTGGGEKLEFVHKTPVEDVPLAIAPFQGRIL
VGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGIYTIGQRVIVSDVQESLFWVRYRRNENQ
LIIFADDTYPRWVTTACLLDYDTMASADKFGNISIVRLPPNTSDDVDEDPTGNKALWDRG
LLNGASQKAEVVVNYHVGETILSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgtacaacatcaccttacagcgtgccacgggcatcactcacgccatccatgga
aacttctcaggaaccaagatgcaggagattgttgtctcaagaggaaagatcttggaattg
ttgcggccagatgccaacacaggaaaggtgcacacgctgctaacagtggaggtgtttggc
atcgttaggtccctgatggccttcagactcacgggaggaaccaaagattacattgttgtt
ggaagtgacagtggtcgtattgtgatcctggaatatcatccatcaaaaaacatgtttgag
aagattcatcaggaaacatttgggaagagcggctgcagacgcatcgtccccggccagttc
ctggctgttgacccgaaaggcagagctgttatgataggagcgatagagaaacagaagctg
gtttatattctgaacagagatgcagctgcaagactgaccatctcctctccactggaggca
cacaaagcaaacacactggtttaccatgtagtaggagttgatgtcggctttgaaaatccc
atgtttgcctgccttgaaatggactatgaggaagctgacaatgacccgacaggagaagct
gccgctaacacacaacagacactcaccttctacgagctggacctcgggctgaatcacgtg
gtccgcaagtacagtgaggctttggaagagcacggaaatttcctcatcactgttcccgga
ggctcagatggacccagtggagttctgatctgctctgaaaactacatcacttacaagaac
tttggagaccagcctgacatccgctgtcccatcccgcgacgcaggaatgacctggatgac
ccggagcgtggcatgatatttgtctgctcagccacccacaagaccaagtccatgttcttc
ttcttggctcagactgagcagggagacatctttaaggttaccctggaaacagatgaggaa
atggtcacagaaatcaggctcaagtactttgacacgatccctgtggcaacagccatgtgt
gtcctgaagactggcttcctgtttgtgtcttcagagtttggaaaccattacctttaccaa
atagcccacttgggtgatgatgatgacgagcctgagttttcctctgcaatgccactagaa
gagggagacaccttcttcttccagccccgtcccctcaagaaccttgtgctggttgatgaa
caggagaacttatcacccatcatgtcttgccagattgctgatttggccaatgaagacacg
ccacagttgtatgttgcctgcggacgaggaccccggtctactctgagggtccttagacat
ggactagaggtgtcagagatggctgtgtctgagctgcccggtaacccaaatgctgtgtgg
acagtacgcagacatgtggaagatgagtttgatgcctacattattgtgtctttcgtgaac
gccactctggttctgtccatcggggagactgtagaagaagtgactgattctggatttctg
ggaacaacacccactctctcctgctctctgcttggtgaagacgccttagtacaggtgtac
ccagacggtatccgccacatccgagctgacaagcgtgtgaatgagtggaagactccaggc
aaaaaaaccattgtccgctgcgctgtgaaccagcgacaggttgtcatcgcactcactgga
ggggagctggtgtactttgagatggacccgtccggccagctgaatgagtacactgagcgg
aaggagatgtctgcagacgtggtttgcatgagcttggctaacgttccacctggtgagcaa
cgttcacgattcctggctgttggactggttgacaacaccgtccgaatcatctccttggac
ccttcggactgccttcagccgttgagtatgcaggctcttccagcccagccagagagtctg
tgtatcgttgagatgggaggggttgagaaacaggatgagcttggagaaaagggaaccatc
ggcttcctctacctcaacataggacttcagaacggcgtgttgctgaggactgtgctagac
ccagtgacaggcgacctgtcagataccagaacacgctacctggggtcacgacctgtcaaa
ctcttcagagtcaggatgcagggacaggaagctgtgctggcaatgtccagtcgctcttgg
ctcagctactcgtaccagtctcgcttccatctcacccctctgtcatatgaaactctggag
tacgcctctggatttgcatcagagcagtgccctgaaggcattgtggccatttcaaccaac
acactgagaatcttggctttggagaagttaggagccgtcttcaaccaggtggcatttcct
ctgcaatacactcccaggaagtttgtcatacatccggagaccaacaatctcattttgatc
gagaccgatcacaatgcctacaccgaggcaaccaaagctcagcggaagcaacagatggca
gaggagatggtggaggctgctggtgaggatgaacgagagctggctgctgagatggctgct
gccttcctcaacgagaatctcccagaagccatatttggggcacctaaagctggagcggga
cagtgggcctcactggtgcgtctcgtcaaccccatacagggtgcaacgctggaccaggtg
cagctggaacagaatgaagctgcattcagtgttgcagtttgtcgtttccccaacacagga
gatgattggtacgtgttggtgggtgttgccagagacatgattctcaaccccagatcggtg
ggcgggggcttcatctacacgtatcggctcactggtggaggggagaagctggagtttgtg
cacaagacccccgtagaggatgtgcctttggccattgctccattccagggacgaatcctg
gtgggagtcgggaagctgctgagaatctatgaccttggcaaaaagaagctgcttcgcaaa
tgtgaaaacaagcatgttcccaacctggtgactggcatctacaccatcggccagcgtgtg
attgtgtctgacgtccaggagagtctcttctgggtccgttatcgccgcaatgagaaccag
ctcatcatcttcgctgatgacacatatccccgctgggtgaccacggcctgtctgctcgac
tacgacaccatggcttctgctgacaagtttgggaacatcagcatagtgcgtcttcctcct
aacaccagcgatgatgtggatgaagaccccacagggaacaaagctttatgggatagaggt
cttcttaatggagcatcacagaaggcagaagtggtagtgaactatcacgtaggagagacg
attttatctctccagaaaacaactttgatcccgggaggttcagagtccctggtctacacc
actctatccggaggcatcggcatactggtccctttcacgtcacatgaggaccatgacttc
ttccagcatttagagatgcacatgcgctccgagttccctccactgtgcggcagagaccat
ctcagcttcagatcatactacttcccagtcaagaatgtgattgatggagatctgtgtgag
cagttcaacagtatggaccctcacaagcagaaaagtgtggcagaggagcttgacagaacg
ccacccgaggtctctaagaagctggaggacattcgcactcgctacgccttctaa
DBGET
integrated database retrieval system
