Semicossyphus pulcher (California sheephead): 138613277
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Entry
138613277 CDS
T10596
Symbol
spg11
Name
(RefSeq) spatacsin
KO
K19026
spatacsin
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
DNA repair and recombination proteins [BR:
spul03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
138613277 (spg11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
138613277
NCBI-ProteinID:
XP_069543008
LinkDB
All DBs
Position
Unknown
AA seq
2403 aa
AA seq
DB search
MLEAAPRMESNSIEVCVIPENQHCGQVADILKAELAPGGSLLGCLEVQGRLVVWDPADKE
APPAAVDGCYTDFCWEEVSVHSRGASSFRLLAVGSQCELKLLEVEAERSASTSLLCVSER
PADRLLQTVTEQDQGVCELQTLQVLSFAAGRCCLLLNCDWLLQLQSHQTEEELQTLSCCR
IQLTDNNTHTAIHHCVCRGTMFILSSTGLISVFNTSDGSLLATVDLPAYLSSGLAEDDLI
SSSSFFSSSSPFCLLQVSADLSTAVAVTQSHMAIAVDLNHYFRMYPDHLLCADPPSHPPL
RPQHPRDQDSLPSSDCSLSALGSTFSTDRSWEARLASMYSRAQQTAAPSSSSFSSWSSAL
PHLESHLALSTAHSRVPHGGVTVDFSVTETSTPSLLTVSEFSAQLTFVSPGNRQTTVALW
DLESGSVSYHEAEGEAAPVQRCGERQQRLLLKKAGVFLVLFSVSQQDLLSRLMLFGSAAT
VDAVCHLNSWGRCSIPIHALQAGLKNRQLDTVDFYLKSKENILNPAADQPAASTLSLTAC
VQELCPALDLLCSAVRDSNSEAQSRQFSEQLLNITMSFVNTQIRSVLSNTHYEDAGVRSC
VDVLDRYVTELRSYMKRFPWPAGGDTSSTNSADPSQEEAQRDEWEELPTEEVVRESILTN
QIPRAQAVLRRRSRPEQRLSALRLEGLRLVFSCLQHRDLQTANTLLTNMGFSVKKQLHSI
CLYTDDKDLREFVVEELSGRSYFPEEEMQSVEFIREMEKLGSLPASRCPAKTTSQRTVQM
VQREAGGGEAVLSELVRDRRSEEEGGGLWRNLRLDWVRNWDQSCQTAVLLSRLRHTELTS
CDSAVLWRYLTALHDQLRVVDWIQDNKSSSASQWPELTPELVNNNTVCSSYMRENILDLL
ARRGLFIPEELADLEQLLWRLAQGGGVMASSPPVPQYRSPLGLDLHGLFITFCLEHSLQY
LLYSYLEHYRLTPRNCPLLTNQSVSGSQPWFEMLVKIQEITRDLSDPALVFQASLTSAQV
LLPGSQPSLSSLLLEGHSLLALAAVMFAPGGIDQVVVQGERSGRSERTVDPQLLKMALAP
YPKLRAALFPAGPRGNSSSSDISVYHLLQSLHPLDPSRLFGWQAANTLNSTETSELPHFS
SPHLVNRFALVENLDFLYYLRHGRPSFAYATFLVQQLSGCSDVTLLLQQALQQVYRLALQ
CFDVPSVTSASVCFCELLGVCSLKLRVDIRAMNTILQHWNQNNTHSATAQSLHTLGVKLA
EAEPEAAEELIGYLEAAVTHSMEQKGTSRSSYEAAQEWALPVQFCQLHSLKLSSVYPAHC
AADGQFIHFLLFVQLHSFPPQQVRSLAAQFGSALQAHLSLAFQDLQVYSQRRSGGSEEQQ
SGSPSTDRAFGDLENPRELFQVLLQSQEEEAQCRYLLQEALVQRCPTLAVLAACQQGAGL
LPCLCVWVLTSVDDVTAEEATSHLVEAPQHHEWTLHDLSIIWKTLLGRGHVRPLLRGFQL
FQRDSPLVLVLRMFELCCDYRNFSEAKAKLLDFQRTLIALRNGGPAPSGGLPLQWVESQA
SVLLLTMLQRCSSQYDLPRLLQLLADVDKLLKSNGPDFRKLSQLSQLLQGSEVSVSPRLL
QCSSPSVQQEEFQAAVDALQARGRYSQARQVALLAGLPVHRLLLSQLLQEVSSQKSKRQW
RRLETRVSFWRKCHDQLKADSTDPESASHFFLSQAESEPADLSEAAEAQSELMDVQERCL
LLCLAAHWLSLLCPPPVDKLESLEKKLWISRVRRHVLTVSIEKESVFNLPPPAITPEMNT
YAVLMKEFSFSNISGLNTEKRLSLEGLPGPSEEQEKRDIDPALGPEERSVLAALIGQLLD
EGSIHEASRVCRYFSMHHPDMWVVLRCRGLASGEPNAEPQEEASEALPRTTIPSSASINS
LSSFVVLPLPEDEVALQLQKLVNQCRHGNNYCKQVLSLYQLSKELQCSFSQICGEEPRSV
LEKLLLSEQPERFRKAQAFIKAQGLSADSVAQLVSSAVVQALLASAQELQPERQVFRPSE
GRDSLVQLIKLCEDPNLVGLQLLENLSTVPLRDLSCIVELLIVAHDCFSLTCNMEGIVRV
LQAARHLSHTHLAPGEHYSLLVRLLTGIGRYNDMTYVFDLLHQNHRFEMLLRKKVDTDRG
QSSSLKTALLDYIKRCLPADSEKHNMVALCFSMRREIGENHEMAARTQLKIIESQAWVVT
PDLKSLLVKVLGLLKDAAESFSKDSCVRQATRCVRTAKLVALQLHFLSQGLDLRVINLRP
AELLNTVIALPRCYQVFVVSEAYSYSPDWAEILYQKVILKGDFVYLEELKRHRPLTSSLF
EDIFKKLDGAPSSVTANIKRLLTHCDDVYSRYRLAYQKKLFDVTKTLLQDAKTSSYLNDR
LAS
NT seq
7212 nt
NT seq
+upstream
nt +downstream
nt
atgttggaggcggctccgcgcatggagagtaactccatagaggtgtgtgtgatcccggag
aaccagcactgtggacaggtcgcggacatcctcaaagctgagctggctcctgggggctcc
ctgctcggatgtctggaggttcaggggcggctggtggtgtgggacccggccgacaaggag
gctcctccggccgcagtggacggctgctacacagacttctgctgggaggaggtgagcgtc
cacagccgtggggccagcagcttcagactgctggctgtggggtctcagtgtgagctgaag
ctgctggaggtggaggcagaacgatcggcctccacctctctgctctgtgtgtctgaacgt
cctgctgaccgcctgctgcagactgtcacagagcaggaccagggtgtgtgtgagctgcag
acgctgcaggtgttgtcgtttgctgccggccgctgctgcctgctgctgaactgtgattgg
ctgctgcagctgcagagtcatcagacggaggaggagctgcagacgttatcatgctgcaga
atccagctgactgacaacaacacacacacggccatccatcactgtgtctgcagaggaacc
atgttcatcctcagcagcactgggctcatatctgtgtttaacacctctgatggcagcctg
ctggccacagttgacctccctgcctacctgagctctggcctggctgaggacgacctgatc
tcctcctcttccttcttctcctcctcttccccgttctgcctcctccaggtgtcagctgat
ctcagcacagctgtagccgtcactcagtctcacatggccatcgctgtcgacctcaaccac
tacttcaggatgtatccggaccacctactgtgtgctgatcccccctctcaccctccactc
cgaccccagcacccgagggaccaggacagcctgccgagttccgactgcagcctcagcgct
ctgggatcgacctttagtaccgaccgctcctgggaagctcgtctggcctccatgtacagc
agagcccagcagactgcagctccttcctcttcctccttctcctcctggtcctccgccctc
ccccacctggagtcccacctggctctgtccacggcccacagcagagtgcctcatggcggg
gtgacagttgatttctccgtcaccgagacgtccactccgtctctgctgactgtgtccgag
ttctccgcccagctgaccttcgtctcacccggcaacagacagaccacagtggccttatgg
gatttagagtccggcagtgtgagttaccacgaggcggagggcgaggccgctccggtccag
cgctgcggagagagacaacagcgactgctgctgaagaaggccggcgtgttcctggtcttg
ttctcggtttcccagcaggacttgctcagcaggttgatgttgttcggcagtgcagcaaca
gtagacgcagtctgtcacctgaacagctgggggcgctgctccatccccatccacgccctg
caggccggactgaagaaccgtcagctggacacggtggatttctacctgaagagtaaagaa
aacatcctgaaccctgcagccgatcagccggccgcctccacactcagcctgactgcctgt
gtgcaggagttgtgtcctgcgttggacctgctgtgttcggccgtcagagactcgaacagt
gaagctcagagccggcagttctctgagcagctgctcaacatcaccatgagcttcgtcaac
acacagatccgctccgtcctgtccaacacacactacgaggacgcaggcgtgcggagctgc
gtggatgttcttgatcgatacgtcacagaactgaggagctacatgaagagattcccctgg
cctgcagggggcgacacctccagcaccaattctgctgatccgtctcaggaggaggctcag
agggacgagtgggaggagctaccgacagaggaagtggtccgcgagtccatcctgaccaat
cagatccccagagcccaggccgtcctgcggaggcggagccgtccggagcagcgtctgtcg
gctctgaggttggagggtctgcgtctggtgttctcctgcctgcagcaccgagacctgcag
accgccaacacgctgctcaccaacatgggtttcagtgtgaagaagcagctccacagtatc
tgcctctacaccgacgacaaagacctcagggagtttgtggtggaggagctgtcagggcgg
agttatttcccagaggaggagatgcagagtgtggagttcataagggagatggagaagttg
ggatcactgcctgcatcccgctgccctgcaaaaaccacatcacagaggacggttcagatg
gtccaaagggaagcaggtggtggtgaggcggttctgagtgagctggtgagagacaggagg
tctgaggaggaggggggggggctctggaggaacctcagactggactgggtgaggaactgg
gaccagagctgccagacggccgtcctcctgtccagactcagacacacagagttgacttcc
tgtgactcggccgtgttgtggcgttacctgacagccctgcacgaccagctccgggtggtc
gactggatccaggacaacaagtcctccagcgcctcccagtggccggagttaaccccggag
ctggtcaacaacaacacggtgtgcagcagctacatgagggagaacatcctggacctgctg
gccaggagaggcctgttcatccctgaggagctggctgacctggagcagctgctgtggagg
ctggctcagggcgggggggtgatggcctcctcccctcccgtccctcagtaccgctccccc
ctcggcctcgacctgcacggcctcttcatcaccttctgcctggagcacagcctgcagtac
ctgctctactcctacctggagcactacaggttgacacccagaaactgtcccctgttgacc
aatcagagcgtgtcagggagccagccctggtttgagatgctggtgaagatccaggagatc
accagagatctgtcagatccagcactggtgttccaggccagtctaaccagtgctcaggtg
ttgttacctggcagccagccgtctctgagcagcctgctgttggagggacacagtctgctc
gctctggctgctgtcatgttcgcccccgggggaatcgaccaggtggtcgttcagggtgaa
aggtcgggcagatcagagaggacggttgacccccagctcctaaagatggctctggccccc
tacccgaaactgagggccgccctgttccctgccgggccccgaggaaacagctcgtcctct
gacatctccgtctaccacctgctgcagtcgctccatcctctggacccgagcaggctgttc
ggctggcaggcagcaaacaccctcaactccacagagacgtcagagctgcctcatttctcc
agccctcacctggtcaacaggttcgctctggtggagaacctggacttcctgtattacctg
cgtcatggccgcccatcttttgcgtacgccaccttcctcgtccagcagctgagcggctgc
agtgacgtcacgctcctgctgcagcaggccctgcagcaggtgtaccggctggccctgcag
tgcttcgatgtcccgtctgtgacgtcggcgagcgtctgtttctgtgagctgctgggcgtc
tgcagcctcaagctgagggtcgacatcagagccatgaacaccatcctgcagcactggaac
cagaacaacacacactctgctaccgcacagagtctacacactctgggtgtaaagctggcg
gaggcggagcctgaagcagcagaggagctgattggctacctggaggctgcagtgactcac
agcatggagcagaagggcaccagcaggtcgtcctacgaggcggctcaggagtgggcgttg
cctgttcagttctgtcagctccacagtctgaagctcagctctgtttaccccgcccactgt
gccgctgacggacagttcatccacttcctgttgtttgtgcagctgcacagcttcccgcct
cagcaggtgaggtcattggcagctcagtttggctccgccctgcaggcccacctgagtctg
gccttccaggacctgcaggtgtacagtcagaggaggagcgggggctctgaggagcagcag
tcagggtctccgagcacagacagggcctttggggacctggagaaccccagggagctgttc
caggtcctcctgcagagtcaggaggaggaggcgcagtgcaggtacctgctgcaggaggcg
ctggtgcaacgctgcccgacactggctgtactggctgcctgtcaacagggggcggggctg
ctgccgtgcctatgtgtgtgggtgctaacctcggtcgatgatgtcacagctgaggaagcc
acctcccacctggtggaagccccccagcaccatgagtggaccctgcatgacctgtcaatc
atctggaagacgctgctggggcggggccacgtcaggcccctcctacgaggcttccagctc
ttccagagggactcccctctggtgttggtgctgaggatgtttgagttgtgttgtgactac
aggaacttctctgaggccaaagccaagctgttggacttccagaggacactcatcgctctg
agaaacggcggcccagcgccctccggtggactccccctgcagtgggtggagagccaggcc
tccgtgctgctcctcaccatgctgcagcgctgctcctcccagtacgacctcccccggctg
ctgcagctcctcgcagacgtcgacaaactcctcaaatccaacggtccagacttcaggaag
ctcagtcaactgagtcagctgctgcaggggtcagaggtcagcgtgtctcccaggctgctg
cagtgcagttctccctccgtccagcaggaggagttccaggctgcagtggacgctctgcag
gccagggggcgctacagccaggcccgacaggtcgctctgttggccggactgcccgtccac
cgcctgctgctcagccagctcctgcaggaggtgagctcccagaagtccaagcggcagtgg
agacggctggagacacgagtcagtttctggaggaaatgtcacgatcagctgaaggctgac
agcactgatccagaatccgcctcccacttcttcctgtctcaggctgaatctgagcctgca
gacctgtcggaggctgcagaggcccagagcgagctgatggacgtccaggagcgctgcctg
ctgctctgcctcgccgctcactggctctccctgctctgcccgcctcctgtggacaaactg
gagagtctggagaagaagctgtggatcagccgggtcagacgccacgtcctcaccgtctcc
attgagaaggagagcgtcttcaacctgccgccgcccgccatcacgccagaaatgaacacg
tacgcagtcctcatgaaggagttctccttctccaacatatcaggcctgaacacggagaag
cgtctgagtctggagggacttccgggtccctctgaggagcaggagaagcgggacatcgac
ccggcgctcggcccagaggagaggagtgtcctggctgctctgattggtcagttgttagat
gaaggaagtatccatgaagccagtcgggtctgccgttacttctccatgcatcaccccgac
atgtgggtggtgctgcgctgcagaggtctggcctctggagagccgaacgctgagccacaa
gaagaagcatcagaggctctgccaaggaccaccattcccagctctgcctccatcaacagc
ttgtcgtctttcgtggttctcccgctccctgaagacgaggtcgccctgcagctgcagaaa
ctcgtgaatcagtgtcgacacggaaataactactgtaaacaagtcctcagcctctaccag
ctctccaaggagctgcagtgctccttcagtcagatctgcggggaggagcctcgctcagtg
ctggagaagctgctgctgtcggagcagccggagcgcttcaggaaggctcaggccttcatc
aaagctcagggtctgtctgcagactctgtggcccagctggtgtcctctgctgtggtgcag
gcgctgctggcctccgcccaggagctgcagccggagaggcaggtattcaggccgtctgag
gggcgagactcgctcgtccagctcatcaaactgtgtgaggatccgaacctggttggactc
caactgctggagaacctcagcactgttcctctgcgagacctgagctgcatcgtagagctg
ctgatcgtggctcacgactgtttcagtctcacctgtaacatggaggggatcgtccgagtg
ctccaagccgcccgtcatctcagccacacccacctcgccccgggagagcactacagcctg
ctggtgcgtctgctgacaggtatcggcaggtataacgacatgacgtacgttttcgacctg
ctgcatcagaaccatcgctttgagatgctgctgaggaagaaagtggacacggacagagga
cagagctccagcctgaagacggctctgctggactacataaagcgctgcctgcctgcagac
agcgagaaacacaacatggtggcgctgtgtttcagcatgaggagggagatcggagaaaac
cacgagatggctgcaagaacgcagctgaagatcatcgagtctcaggcctgggtggtgact
cctgacctgaagagcttgctggtcaaagtgttgggcctgctgaaggacgctgcagagagc
ttctcaaaggactcgtgtgtgcgtcaggccactcgctgtgtgcgcacagccaagcttgtt
gctctccagctgcacttcctgagtcagggattagacctgcgtgtcatcaacctgcgacct
gcagagctgctgaacaccgtcatagcgctgccacgatgctaccaggtgttcgtggtgtcc
gaggcgtacagctacagtccagactgggcggagatcctgtaccagaaggtgattctgaaa
ggagactttgtttacctggaggagctcaaacgccaccgacctctgacctccagcctgttt
gaggacattttcaaaaagctcgacggcgctcccagcagcgtcaccgccaacataaagcgc
ctgctgactcactgtgacgacgtgtacagccgctacaggctcgcctaccagaagaagctt
ttcgatgtcaccaaaacactgctgcaggacgccaagacgtccagctacctgaacgacagg
ctggccagctga
DBGET
integrated database retrieval system
