Semicossyphus pulcher (California sheephead): 138613542
Help
Entry
138613542 CDS
T10596
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04814
Motor proteins
Brite
Messenger RNA biogenesis [BR:
spul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
138613542 (myo5c)
mRNA cycle factors
P-body specific factors
138613542 (myo5c)
Membrane trafficking [BR:
spul04131
]
Others
Actin-binding proteins
Myosins
138613542 (myo5c)
Mitochondrial biogenesis [BR:
spul03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
138613542 (myo5c)
Cytoskeleton proteins [BR:
spul04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
138613542 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138613542
NCBI-ProteinID:
XP_069543342
LinkDB
All DBs
Position
Unknown
AA seq
1743 aa
AA seq
DB search
MALLELYTQYNRVWIPDADHVWKSAEIRRDFRFGDNVLELLLEDGTEYSHPVDPSKPQLP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESRIIYTYCGIILVAVNPYKQLHIYG
DAIIHAYSGQNMGDMDPHIFAVAEEAYKQMARNHKNQSIIVSGESGAGKTVSARYAMRYF
AVVSKSGSKTRVEDKVLASNPVTEAIGNAKTTRNDNSSRFGKYTEISFDRKFRIIGANMR
TYLLEKSRVVFQAENERNYHIFYQMCSCAHLAEFKNLRLLSADKFQYTCMGGDITIEGVD
DKKDMEETRRTFSLLGLKEDFQSDVFKVLAAVLHLGNVEIKTSGGDKSSVPLSDPHLLVF
CELLGVSAEGLVRWLSHRRIVLVAETVVKPVSKEKATNARDALAKQIYAHLFDCIITRIN
TALQVPGKQHAFIGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMRE
DIPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDRSWLQKLFNYLDANPLFEKP
RLSNEAFVIQHFADKVEYQCKGFLEKNRDTLYEEVVDIMRASKFPFLANFFQEEERGALN
SRGIKVRPARPGVKAANKQLRASVGDKFSSSLSLLMETLNATTPHYVRCIKPNDEKLAFE
YDSRRVVQQLRACGVLETIRISAQSYPSRWTYNEFYSRYSILMSPQEADLSDKKQTCKNV
LQRLIQDPNQYKFGRTKIFFRAGQVAYLEKLRLDRLRGACVTIQKRVRGWSQRRKYLRMR
EAAIILQQYIRGEKTVRKTVSPATLKQGWAALVIQRHWRGYRMRQIYQVVRLASVTIQAF
TRGWMARKQYKKMMKEQKALVLQKYARAWLARRRFQTMRRLVQNVQLSFRVQQLRKKIEE
QSKENCGLLERLTTLATTHSQTMEKLQGVEVKLEKSTNLKASVEAREKKAQEEADVVTAK
LQKEINALNVQKESLKREFEVATLKDKENFDDIKRSLLEEKEYEARLRKIAENNNEIQRQ
DHEKEVDALKEEIRTLKEERVSLLRRIEEAGLVNADLQEQITQLTKHVKTIPELRRDLNN
LQNQRNNMDRKMKQQSEQAKVKMSAITRQLLGGVVVEEEVLLGLSPDDPEKICEVEDMMA
AFDGLQKATRLMETRQKEQKEKYETQVEGFKFKVDHLQNENSKLQNLFQEKSNVNENIRQ
EVSRLSSENSVIPELKLQVSDLQRQKQELEAHAEEQSRELAGKTEEITNVLQKQIKEEGS
QRRHLEEKAEELEEQKRELQEQVEELKEEDDHLKRQLLMESEAKSKLRQETSRLMAENMD
FEEQLDHKDRLIKKLQKQIKSLETSQKAKQTSAPAVPKDFLGMLEYKREDEARLIQNIIL
ELKPKGVVVGMIPGMPAYILFMCVRHVDYLNDEAKLKSLMNAIIGAVKKVIMSYHKDFEL
LSFWLSNTLHLLNCLKQYSGEEEFMKQNTPRQKKNCLQNFDLSEHRQILSDLAIHIYHQF
ISVMEKSLNPAIVPGMLEHESLQGISSMKPTGFRKRSDSIYEDSDTYTISSIIQQLSAFL
SVMSQHGMEQGLIRQVVKQLFFMVGSTTLNNMMLRKDMCSCRKGMQIRCNISYLEEWLKE
KELQSSNAIDTLKPLSQAAWLLQVSKSTDGDAKDIAEKCTELNTVQIVKILNSYTPIDDF
EKRVSSSFVRKVQSSRHDREGYTHLMLDSDYRFQVTFPFCPTSQALELLQVPNSLHLGFL
TRI
NT seq
5232 nt
NT seq
+upstream
nt +downstream
nt
atggctttgttggaactgtacacacagtacaacagagtgtggataccagacgcagaccat
gtttggaaatcagctgagatcaggagagattttcgctttggggataatgttcttgaattg
cttcttgaggatggcacggagtacagccaccctgtggacccatcaaaacctcagctccct
cctcttcgtaaccctgacatcttggtgggggagaatgacctcaccgctctcagctacctg
catgaacccgcagtcctgcacaatcttaaagtgcgatttgtggagtccagaatcatctac
acctactgtggtatcatcctggtggctgtaaatccatacaaacagctccatatctatggg
gatgcaatcattcatgcctactcaggccagaacatgggagacatggaccctcatatattt
gcagtggcagaggaggcttacaaacagatggccagaaaccacaagaaccagtccatcatc
gtcagtggtgagtctggagccgggaaaacggtgtccgctcgatacgctatgaggtacttt
gctgttgtaagcaaatctggaagtaagactcgggttgaagataaagtcctggcgtcaaat
ccagtaacagaggcgataggaaatgcaaagaccaccaggaacgacaacagcagccgtttc
gggaaatacaccgagatcagctttgacaggaagttccggatcatcggagcgaacatgagg
acctatctcctggagaaatccagagttgtttttcaggcagaaaacgagaggaactatcac
atcttctaccagatgtgctcctgtgctcacctcgcagagttcaagaatctgagactgttg
agtgcagataagttccagtacacctgcatgggcggtgacatcacaattgaaggtgtagat
gacaagaaagacatggaggagacgcgacggaccttctccctgcttgggttgaaggaggac
ttccagtcagatgtgttcaaagttttggccgccgttctgcatctgggaaatgttgaaatc
aagacctctggaggcgacaaatcctcagttcctctcagcgatccacacctgctggtcttc
tgtgagttgctgggagtgagcgccgaggggttggtgcgttggctgagccatcggaggatc
gtgctggtggctgagactgtggtgaagcctgtgtccaaagagaaggcgacgaatgccaga
gacgctctcgccaagcagatctacgcccatctgttcgactgtattattaccaggataaac
acagcgctgcaggttccaggaaagcagcatgctttcattggtgttctggacatttatggc
tttgaaacgtttgacatcaacagctttgagcagttttgtatcaactatgcaaatgaaaag
cttcaacagcagttcaacttgcatgtgttcaaactggagcaggaggagtacatgagagag
gacatcccctggacactgatcgatttctatgacaatcagccggtcattgatctgatcgaa
gcgaagatggggatcctggacctgctcgatgaagaatgtttgtttcctcaaggcactgat
cgaagctggctacaaaagctgttcaactacctcgatgccaatcctctgtttgagaagccc
aggctgtcaaatgaggcattcgtgattcaacattttgcagacaaggtggaatatcaatgc
aaaggttttcttgagaagaacagagacactctctatgaagaggtggttgacattatgaga
gccagtaagtttccctttctggccaactttttccaagaggaggagcgaggcgctttgaac
agtaggggtatcaaagtgaggcccgccaggcccggagtgaaagcagccaataaacagctg
agagcctctgtgggagataagttcagcagctccctctctttactgatggagacactgaat
gccaccaccccgcactatgtgcgctgcattaagcccaatgatgaaaagcttgcgtttgaa
tacgactcgaggagggtggtgcagcagctgcgagcctgcggagtccttgaaactattcgc
atcagtgcacagagctatccatccaggtggacgtacaatgagttttacagccggtacagt
atcctgatgtcacctcaggaggcggacctcagtgacaagaagcagacctgcaagaacgtc
ctgcagaggctgattcaggaccccaaccagtacaagtttggacgtacaaagatcttcttc
agagctggacaggtagcatatctggagaaacttcgcctggaccgactgagaggcgcctgt
gtgaccatccagaaacgagtccgcgggtggagccagaggaggaagtacctgcgcatgaga
gaggcagccatcatcctccaacagtacatccggggagagaagacagtccgtaaaacggtg
agtcctgccactctgaagcagggctgggcagcgctggtgatccagagacactggagaggt
taccgcatgaggcagatctaccaggtcgtccgtctggcatccgtcaccatccaggccttc
acacgaggatggatggcgcggaaacagtacaagaagatgatgaaggagcaaaaagccctt
gttctgcagaagtatgcccgagcgtggctggcacgccggcgtttccaaacaatgcgtcgc
ctggtgcaaaacgtccagctgtccttcagggtgcagcagctcagaaagaagattgaagag
cagagcaaagagaactgtggattactggagaggctgaccaccttggccaccacccactct
caaacaatggaaaagcttcagggtgtggaagtgaagctggaaaagtccaccaacctgaag
gcatcggtggaggcgagggagaagaaagcacaagaagaagccgatgtggttactgctaag
cttcagaaggaaataaatgcactcaacgttcaaaaggagagcttaaagagagagtttgaa
gttgccaccttgaaggacaaagagaactttgatgacataaagaggagccttctggaagag
aaagaatatgaagccaggctcaggaagattgcagagaacaacaacgagatccagagacag
gaccacgagaaggaggtggacgctctgaaagaggagatcaggacactgaaagaagagcga
gtcagtctgctgaggaggatcgaggaggcggggctggtgaacgctgacctgcaggaacag
atcacacagctaaccaaacatgtcaaaactatccccgagctacggcgagacctcaacaac
ctgcaaaaccagaggaacaacatggaccggaagatgaagcagcagtcggaacaagcaaaa
gtgaaaatgagcgccatcacaagacagcttcttggcggtgttgttgttgaagaggaggtt
cttttggggctgagtccagacgacccggagaagatctgtgaagtggaagatatgatggca
gcctttgacggtctacagaaagctaccagattaatggaaacccgccagaaggagcagaag
gaaaaatatgagacccaagtggagggcttcaaatttaaagtggaccatcttcagaatgag
aacagcaagttgcagaacctgtttcaggagaagagtaacgtcaacgagaacattcgacaa
gaggtgtccaggctcagcagtgagaactcggtcataccagagctgaagctgcaggtttca
gacctgcagagacaaaaacaagagttggaggcccatgcggaggagcagagcagagaacta
gcaggaaaaacagaggagatcacaaacgtccttcaaaagcagatcaaagaagagggctca
caacgcaggcacttggaggagaaagccgaagagctggaggagcagaagagggagcttcaa
gagcaagtggaggagctgaaggaggaggacgatcacttgaagagacagctgctgatggag
agcgaggccaagagcaagctgaggcaggagacttcgcggttaatggcggagaatatggac
ttcgaggagcagctcgaccacaaagacagattaataaagaagctccagaaacaaataaag
agcctggaaacttcacagaaagcaaaacaaacatcggcgcctgctgttcccaaagatttc
ctcggcatgttggagtacaagagagaggacgaagccaggctcattcaaaacatcatcctc
gagctgaagccgaaaggcgtcgtggtcggtatgatccctgggatgccagcttacatcctc
ttcatgtgcgtgcgtcatgtcgactacctgaacgatgaagccaaactcaaatctcttatg
aatgcgatcatcggggctgtcaaaaaggtcatcatgagttaccacaaagacttcgagttg
ttgtcattctggctctcaaacacgttacacctgctcaactgtctgaagcagtacagcggg
gaggaggagttcatgaaacaaaatactcctcggcagaagaagaactgcttgcagaacttt
gatctgtcggagcacaggcagattctcagcgacctggccatccacatctaccatcagttt
atatcagtcatggagaagagcctcaatcctgccattgtacctggcatgttggagcacgag
agtttgcaggggatttctagcatgaagccgacgggcttcaggaagcgatcggacagcatc
tacgaggactcggacacctacaccatctcctccatcattcagcagctcagcgccttcctg
tccgtcatgagccagcacggcatggagcagggcctcatccggcaggtcgtcaagcagctc
ttcttcatggttggttccacgaccctcaacaacatgatgctgcgcaaagacatgtgttcc
tgcaggaaggggatgcagatcagatgcaacatcagttacctggaggagtggctgaaggag
aaggagctgcagagctctaatgctatagacactttgaagccgctgtctcaggccgcctgg
ctgctgcaggtcagcaagtccactgatggtgacgcgaaggacatcgctgagaaatgcact
gaactcaacactgtccagattgtcaagattttgaactcctacacacccatcgatgatttt
gagaaaagggtgtcgtcgtcatttgtccgcaaagttcagtcatcgcgacacgatcgtgaa
ggctacactcatctcatgctggactcggactatcgcttccaggtcacgtttcctttctgc
ccgacctcgcaggctctggagctgctgcaggtcccaaacagccttcatctgggcttcctc
accaggatctga
DBGET
integrated database retrieval system