Semicossyphus pulcher (California sheephead): 138613551
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Entry
138613551 CDS
T10596
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03022
Basal transcription factors
spul03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
138613551 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
138613551 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spul03021
]
138613551 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
spul03400
]
138613551 (gtf2h1)
Transcription machinery [BR:
spul03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
138613551 (gtf2h1)
DNA repair and recombination proteins [BR:
spul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
138613551 (gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
138613551
NCBI-ProteinID:
XP_069543361
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MASLSEEVLLVVKKVRQRKQDGTLYLMAERIAWGPEGKDRFTVSHLYADIRCQKISPDGK
AKIQLQLVLHTGDSTTFHFANESTALKDREAAKELLQQLLPKFKKKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISADEFWANRLGDINNTDPALYNNKQEVGISGAFLADIRPQTDG
CNGLRYNLTADIIESIFRTYPAVKQKYSENVPHELTEKEFWTRFFQSHYFHRDRINTGTQ
DIFSECAKQDEKGLKSMVVQGVKNPLVDLLSLEDKTLDEGYGIAIAPASTSNMNRTVKES
SNAAIIKRFNHHSAMVLAAGSRKGETPTDQASETSSTDGNSRDSDFFQPPVKKVKLQEAI
EYEDLQRENRPKTVALNLKKSDRYAHGPVPLQSQQYSTSQDIINSVNYIQHEMVNYKPNL
TQVLSSTTATSAIAALSPGGVLMLAGAQQAISQMVPTDVQGELKHLYAAAGELLRHFWSC
FPVNTPFLEEKVTKMKSNLERFQMTKLRPFQEKIQRQYLSTNLTGHLEEMLQTAYNKFHI
WQTRRMLRKT
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcatcactctcagaggaggtgctgctggtggtgaaaaaggttcgccagaggaagcag
gatggcacactgtatctgatggctgaacgtatagcctggggcccagagggcaaagaccgt
ttcacagtcagccacttgtatgcagatattcgctgtcagaagataagcccagatggtaaa
gccaaaattcagctccagctggtccttcacaccggcgatagtaccacattccactttgcc
aatgagagcactgcactgaaagacagagaggctgctaaggagctgctgcagcagctactg
cccaagttcaagaaaaaagccaacaaagaacttgaggagaaaaacaggatgcttcaagaa
gatccagtgctttttcagttatataaagatctcgtcgtgagccaagtgatcagtgctgat
gaattctgggccaaccgattaggagacataaacaacacagaccccgcactatacaacaac
aaacaggaagtcggtatatctggagcctttctggcagacattagacctcagacagatggc
tgcaatggcttgagatataatctgacagcagacattattgaatccatcttcagaacgtac
cctgcagtcaagcagaagtacagtgaaaatgtgcctcatgagctgacggagaaggaattc
tggacaagatttttccagtcccattatttccacagagaccgcatcaacacagggacgcag
gatatcttctcagagtgtgccaagcaggatgaaaaggggttaaagtctatggtggttcaa
ggggtaaagaatcctttggttgacctcctctccttagaggataaaacattggatgagggt
tacggcattgccatagcacctgcctcaacttctaacatgaacaggacagtaaaggagagc
agcaacgctgccatcataaaacggttcaaccatcacagtgccatggtgctggcagcaggc
tcacgcaagggggaaacaccaactgaccaagcaagtgagacgagcagtacagatggaaac
tcgagagattctgacttctttcagcctccagtgaagaaggttaaattacaagaagccatt
gaatatgaagatctgcaaagggaaaacagaccaaaaacagttgcgttaaacctcaagaag
tctgacaggtatgctcacggccccgtgccccttcagtcccaacagtattcaacaagccag
gatattatcaactccgtcaactacatccagcacgagatggtcaattacaagcccaacctc
actcaggtgttgtccagcactacagctacttctgccattgcagcactttctccaggtggt
gtcctaatgctggcaggagcgcagcaagccataagtcagatggtacctactgacgttcaa
ggagagttgaagcatctttatgcagcagctggagagttgttgagacatttctggtcctgt
tttcctgtaaacacaccatttttagaggagaaggtgacgaagatgaagtcaaaccttgaa
agatttcagatgaccaagcttcgtccttttcaggagaagattcagcgtcagtacttaagt
acaaatctcacagggcatttggaggagatgctgcagacagcttataacaagttccacatc
tggcagacacgacgcatgttgaggaaaacttga
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