Streptomyces fodineus: BFF78_00090
Help
Entry
BFF78_00090 CDS
T05140
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
spun
Streptomyces fodineus
Pathway
spun03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spun00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BFF78_00090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spun03021
]
BFF78_00090
03400 DNA repair and recombination proteins [BR:
spun03400
]
BFF78_00090
Enzymes [BR:
spun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BFF78_00090
Transcription machinery [BR:
spun03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BFF78_00090
DNA repair and recombination proteins [BR:
spun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BFF78_00090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
AbiEi_4
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AOR29705
UniProt:
A0A1D7Y2D5
LinkDB
All DBs
Position
complement(21232..22254)
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEQDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLARLNGKGKLEMELTVERGRGYVSAVQNKQVGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
SALAADLALPIEELELTVRSYNCLKREGVHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDGNSGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
gtgctgattgctcagcgtccttcgttgaccgaagaggtcgtcgacgagttccgttcccgg
ttcgtgatcgagccgctggagccgggtttcggttacaccctcggcaactccctgcgccgt
acgctcctgtcgtcgatcccgggtgctgctgtcaccagcatccgcatcgacggtgtcctg
cacgagttcaccaccgtgccgggcgtcaaggaggacgtcaccgacctgatcctcaacatc
aagcagctggtcgtctcctcggagcaggacgagccggtcgtgatgtacctgcgcaagcag
ggcccgggtctggtcaccgccgccgacatcgcgcccccggccggtgtcgaggtgcacaac
cccgacctggtcctcgccaggctcaacggcaagggcaagctggagatggagctgacggtc
gagcgcggtcgcggttacgtctccgccgtgcagaacaagcaggtgggccaggagatcggc
cgtatcccggtcgactccatctactcgccggttctgaaggtcacgtacaaggtcgaggcc
acgcgtgtcgagcagcgcaccgacttcgacaagctgatcgtcgacgtcgagacgaagcag
gcgatgcgtccccgtgacgcgatggcgtcggccggtaagaccctggtcgagctgttcggt
ctcgcccgcgagctgaacatcgacgccgagggcatcgacatgggcccgtccccgacggac
tctgcgctggcggccgacctggcgctgccgatcgaggagctggagctcacggtccgttcc
tacaactgcctcaagcgtgagggcgtccactcggtgggtgagcttgtggcgcgctcggag
gccgacctgctggacatccgcaacttcggtgcgaagtcgatcgacgaggtcaaggcgaag
ctggccggtatgggcctggccctgaaggacagcccgcccggattcgacccgaccgccgcc
gcggacgccttcggcgcggacgatgacgggaactcgggtttcgtcgagaccgagcagtac
tga
DBGET
integrated database retrieval system
