Streptomyces fodineus: BFF78_00610
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Entry
BFF78_00610 CDS
T05140
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
spun
Streptomyces fodineus
Pathway
spun03030
DNA replication
spun03430
Mismatch repair
spun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BFF78_00610
03430 Mismatch repair
BFF78_00610
03440 Homologous recombination
BFF78_00610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spun03032
]
BFF78_00610
03400 DNA repair and recombination proteins [BR:
spun03400
]
BFF78_00610
Enzymes [BR:
spun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BFF78_00610
DNA replication proteins [BR:
spun03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BFF78_00610
DNA repair and recombination proteins [BR:
spun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BFF78_00610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
AOR29790
UniProt:
A0A1D7Y2W5
LinkDB
All DBs
Position
complement(120498..121637)
Genome browser
AA seq
379 aa
AA seq
DB search
MDFRIERGALAEAVAWAARSLPSRSPVPVLGGLMLDAAEGRLRISGFDYEASATIEVPAE
TLTAGRVLVLGRRLLGICRVLPDAMVACALEGTRFTMEGGGTRFGLSTLPMQEYPALPEL
PAFCGTLDAAEFAAGVTQVVIAAGRDDFLPVLTGIQIRLDGESMTLAATDRYRYAVRVVP
WKPEGAVSDAVEVVVPGRRLTEISRALAKSGLIRIGVSGTGGSGGGLIAFEGTGMCTTLR
LLEGRLPRYDKLFTLDRPAVAVTEREALADAVRRVAVVAEPNSPIRLDFSVQGTVLLQAG
YEDDIASQQLAATLANADDLAVAFNPAYLLEALNSFNASQVRFELLGPGQRALLSGVPDE
DDLAREDHRHLLISVRQLS
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggatttccggatcgagcgaggcgctcttgccgaggccgtggcctgggcggccaggtcg
ttgccctcacgttctcctgtgcctgtgctgggtggcttgatgctggacgcggcggaggga
cggctgcgtatctcgggcttcgactacgaagcgtctgcgaccatcgaggtcccggcggag
acgctgacagccggtcgggtgctcgtgctcgggcgcagactgctgggtatctgccgggta
ttgcccgatgcgatggtggcgtgcgcactggaaggaacgcgcttcacgatggaagggggc
ggtacgcgctttgggctgtcgaccttgcccatgcaggagtatccggcccttcccgagctt
cccgccttttgcggaacgttggacgcggcagagttcgcggcgggagtcacacaggtcgtg
atagccgccggccgcgacgacttcctcccggtgctcacggggatccagatccggctggat
ggtgagtccatgacgttggccgctacggatcgataccggtatgccgtgcgtgtggtgccg
tggaagccggagggggcggtttccgatgcggtggaggtagtggtgcccggccgcaggctg
accgagatctcccgtgcgctggcgaagtcggggctgatccgcatcggggtgagcggcacg
ggtggctcgggtggtggcttgatcgccttcgagggaaccgggatgtgtacgacactgcgg
ttgctggaagggcggctgccgcgctacgacaagttgttcacactggacaggccggcagtc
gcggtcacggagcgggaggcactcgccgacgcggtccgccgtgtcgcggtcgtcgcggag
ccgaacagcccgatccggctcgacttctccgtacagggaactgtcctcctgcaagcgggg
tacgaggacgacatcgcttcgcagcaactcgcggctacgttggccaacgccgatgacctg
gcggtcgccttcaaccccgcgtacttgctggaagccctcaactccttcaacgcctcccag
gtgcgctttgaacttctgggccccggccagcgggcactactcagtggcgtaccggacgag
gatgacctggcacgcgaagaccaccgccatctactcatatcagtacggcaactgagctga
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