Streptomyces fodineus: BFF78_10390
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Entry
BFF78_10390 CDS
T05140
Name
(GenBank) AraC family transcriptional regulator
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
spun
Streptomyces fodineus
Pathway
spun03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BFF78_10390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spun03000
]
BFF78_10390
03400 DNA repair and recombination proteins [BR:
spun03400
]
BFF78_10390
Enzymes [BR:
spun01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
BFF78_10390
Transcription factors [BR:
spun03000
]
Prokaryotic type
Helix-turn-helix
AraC family
BFF78_10390
DNA repair and recombination proteins [BR:
spun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BFF78_10390
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
DUF6233
DUF7437
Motif
Other DBs
NCBI-ProteinID:
AOR31391
UniProt:
A0A1D7Y751
LinkDB
All DBs
Position
complement(2567158..2568555)
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AA seq
465 aa
AA seq
DB search
MMDEDTRYEAVRSRDGRFDGVFFFAVETTGIYCRPSCPAVTPKRHNVRFFPTAAAAQGSG
FRACRRCRPDAVPGSAEWNVRADVVGRAMRLIADGVVDREGVAGLAARLGYSARQVQRQL
TAELGAGPVALARAQRAHTARVLLQTTDLPVTEIAFASGFASVRQFNDTVREVYDSTPTE
LRAAAPRGRGVRRAAPGAGIPLRLAYRGPYQAAAVFDQLGEEAVTGVEEVSGAPGGRTYR
RTLRLPYGTGIVAVEERTRAPKAGGGTRPGGWLDARLHLTDPRDLTTAVQRLRRLFDLDA
DPYAVDERLGADARLGPLVAARPGLRSPGAVDPLEPAVRALAGRGGAEELVRRCGKVLDA
PCGSLTRLFPEPAALAEAEPDGPLAALAAALADGTVRLDPGADRDDAQEALLGLPGMDAA
TVATVRARALGDPDVAPPGVEVPDGWRPWRSYAVQHLRVAGEGSR
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
gtgatggacgaggacaccaggtacgaagcggtgcggagccgggacgggcggttcgacggc
gtcttcttcttcgccgtcgagaccaccgggatctactgccggcccagctgcccggcggtg
acgccgaagcggcacaacgtgcggttcttcccgacggccgccgccgcccagggctccggg
ttccgggcctgccggcggtgccggccggacgccgtgccggggtcggcggagtggaatgtg
cgggcggacgtcgtcgggcgggccatgcggctgatcgcggacggcgtcgtggaccgcgag
ggcgtcgccgggctcgccgcgcggctcggctacagcgcccggcaggtccagcgccagctc
accgcggagctcggcgccgggcccgtggcgctggcgcgggcccagcgggcgcacaccgcg
cgggtgctgctgcagaccaccgacctgccggtcaccgagatcgcgttcgcgtccgggttc
gccagtgtgcggcagttcaacgacaccgtccgcgaggtgtacgactccacgcccacggag
ttgcgcgccgccgccccccggggccggggcgtgcgccgggccgctccgggcgcagggatc
ccgctgcggctcgcctaccggggcccgtaccaggccgccgccgtcttcgaccagctcggc
gaggaggcggtcaccggggtcgaggaggtgtccggcgcgccgggcggccgtacctaccgg
cgcacgctgcggctgccgtacggcacgggaatcgtcgccgtcgaggagcgcacccgggcg
ccgaaggccggcggcggcacccggccgggcggctggctcgacgcgcgactgcatctcacc
gaccccagggacctcaccaccgcggtacagcggctgcggcgcctcttcgacctcgacgcc
gacccgtacgccgtggacgagcggctcggcgccgatgcccgcctcggcccgctggtcgcc
gcccggcccgggctgcgctcgcccggcgccgtggacccgctggagcccgccgtccgcgcc
ctggccggaaggggcggcgccgaggaactggtgcggcggtgcggcaaggtgctcgacgcg
ccctgcggcagcctcacccgtctcttccccgagcccgccgcgctcgccgaggccgagccg
gacggtccgctggccgccctggccgccgccctcgccgacggcaccgtacggctggacccg
ggcgccgaccgcgacgacgcacaggaggccctgctcggcctgcccggcatggacgcggcc
accgtcgccaccgtacgcgcccgcgccctcggcgatccggacgtcgccccgccgggcgtg
gaggtgcccgatgggtggcggccttggcggtcgtatgccgtgcagcatttgcgtgtggct
ggggaggggagtcgatga
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