Streptomyces fodineus: BFF78_10995
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Entry
BFF78_10995 CDS
T05140
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
spun
Streptomyces fodineus
Brite
KEGG Orthology (KO) [BR:
spun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spun03016
]
BFF78_10995
Enzymes [BR:
spun01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BFF78_10995
Transfer RNA biogenesis [BR:
spun03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BFF78_10995
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AOR37023
UniProt:
A0A1D7YN52
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Position
2699065..2700255
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AA seq
396 aa
AA seq
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MLEPREGIPPVVADDASLAKVIAAFAAGSGPVAVDAERASGYRYGQRAYLVQLRREGAGS
ALIDPVACPDLSGLGEALSGVEWVLHAATQDLPCLREIGMVPARLFDTELAGRLAGFPRV
GLGAMVESVLGFVLEKGHSAVDWSTRPLPEPWLRYAALDVELLVDLRDALEKELDRQGKL
EWALQEFDAIAAAPPAEPRKDPWRRTSGMHKVRRRRQLGVVRELWETRDRIAQRRDVSPG
KVLSDAAIVEAALALPANVHALAALNGFGHRMGRRQLEQWQAAVDRAKALTESQLPQPGQ
PVTGPPPPRAWADKDPAAAARLSAARAGVTALAEQLNMPQENLVSPDTVRRICWEPPKGG
DAGSVGLALTGYGARAWQVELVTPVLVAALAKNEDA
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
ctgctcgaaccccgcgagggcattccgcccgtcgtcgccgacgacgcctccctcgccaag
gtgatcgccgcgttcgccgcgggctccggcccggtcgccgtcgacgccgagcgcgcctcc
ggctaccgctacggccagcgcgcctacctggtccagctgcgccgcgagggcgccgggagc
gcgctgatcgaccccgtggcctgccccgacctgtccgggctcggcgaggccctgtccggc
gtcgagtgggtactgcacgcggccacccaggatctgccctgtctgcgcgagataggcatg
gtcccggcgcgcctcttcgacaccgagctggcgggccggctcgccggcttcccccgggtc
ggtctcggcgccatggtcgagagcgtgctgggtttcgtcctggagaagggccactcggcc
gtcgactggtcgacccgcccgctccccgagccctggctgcgctatgccgcgctcgacgtg
gagctcctcgtcgacctgcgcgacgccctggagaaggagctggaccggcagggcaagctg
gagtgggcccttcaggagttcgacgcgatcgccgccgcgccgccggccgagccgaggaag
gacccctggcgccgtacgtccggcatgcacaaggtgcgcaggcgccggcagctcggtgtc
gtacgggagctgtgggagacgcgggaccggatcgcgcagcgcagggatgtgtcgccgggc
aaggtgctcagtgacgccgccatcgtcgaggcggcgctcgcgcttccggccaacgtccac
gcgctcgcggcgctgaacgggttcgggcaccggatggggcggcgtcagctggagcagtgg
caggcggcggtggaccgggcgaaggcgctgaccgagtcgcagctgccgcagccgggacag
ccggtcaccgggccgccgccgccgcgggcgtgggccgacaaggatccggccgccgcggcc
cggttgtccgcggcgcgcgccggtgtcacggctctggccgaacagctcaacatgcctcag
gagaacctggtgtctccggacacggtgcggcgtatctgctgggagccgccgaagggcggc
gacgcggggtccgtggggctcgcgctgacggggtacggcgcgcgtgcgtggcaggtggag
ctggtgacgccggtgctggtcgccgcgctggccaagaacgaggatgcctga
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