Streptomyces fodineus: BFF78_11960
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Entry
BFF78_11960 CDS
T05140
Name
(GenBank) DNA topoisomerase IV
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
spun
Streptomyces fodineus
Brite
KEGG Orthology (KO) [BR:
spun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spun03032
]
BFF78_11960
03400 DNA repair and recombination proteins [BR:
spun03400
]
BFF78_11960
Enzymes [BR:
spun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BFF78_11960
DNA replication proteins [BR:
spun03032
]
Prokaryotic type
DNA Topoisomerases
BFF78_11960
DNA repair and recombination proteins [BR:
spun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BFF78_11960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
FliT
ZT_dimer
LRIM1_dimer
HALZ
Motif
Other DBs
NCBI-ProteinID:
AOR31672
UniProt:
A0A1D7Y7W4
LinkDB
All DBs
Position
2965442..2967901
Genome browser
AA seq
819 aa
AA seq
DB search
MARRSTKTPPPDDSYEEKILDIDVVDEMRGSYLEYAYSVIYSRALPDARDGLKPVHRRIV
YQMNEMGLRPDRSYVKCARVVGEVMGKLHPHGDASIYDALVRMAQPFSMRVPLVDGHGNF
GSLGNDDPPAAMRYTECRQAEATSLMTESIDEDTVDFAPNYDGQEREPVALPAAFPNLLV
NGSSGIAVGMATNMAPHNLREVIAAARHLIKYPNADLDALMKHVPGPDLPTGGRIVGLDG
IRDAYATGRGTFKMRATVSIETVTARRQGLVVTELPFTVGPEKVIAKIKDLVNSKKVQGI
ADVKDLTDREHGLRLVIEIKNGFVPEAILEQLYKLTPMEESFGINNVALVDGQPLTLGLK
ELLEVYLDHRFDVVRRRSEFRRTKRRDRLHLVEGLLTALVDIDEVIRLIRSSENSAQAKE
RLMRRFSLSEVQTQYILDTPLRRLTKYDRIELEAEKDKLTAEIEELTRILESDAELRKLV
SAELAAVAKKFGTDRRTVLLESAGAPVAVVPLQVADDPCRVLLSSTGLLARTATDEPFPE
QAGAKRVKHDVIVSAVPATARGEIGAVTSAGRLLRINVVDLPQLPETAAAPNLSGGAPLA
EFVSLEDDETVVCLTTLDESSPGLALGTEQGVVKRVVPDYPSSKDELEVITLKEGDRIVG
AVELRTGEEDLVFITDDAQLLRFQASIVRPQGRPAGGMAGIKLAEGARVISFTAVDPAAD
AVVFTVAGSRGTLDDSVQTTAKLTPFDQYPRKGRATGGVRCQRFLKGEDCLSLGWAGPVP
ARAAQKNGTPADLPELDPRRDGSGTSLPKTVSVVAGPVF
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccgcagcacgaagaccccgccgcccgacgattcgtacgaggagaagatcctc
gacatcgacgtcgtggacgagatgcgtggctcctacctcgagtacgcgtactcggtcatc
tactcgcgcgccctgccggacgcccgtgacggcctcaagccggtgcaccgccggatcgtg
taccagatgaacgagatgggcctgcgccccgaccgcagctacgtgaagtgcgcgcgtgtc
gtcggcgaggtcatgggcaagctgcacccgcacggcgacgcgtcgatctacgacgccctg
gtgcgcatggcccagcccttctccatgcgcgtgccgctggtcgacggccacggcaacttc
ggctcgctgggcaacgacgacccgccggccgccatgcggtacaccgagtgccggcaggcc
gaggcgacgagcctgatgaccgagtcgatcgacgaggacacggtcgacttcgcgccgaac
tacgacggccaggagcgggagccggtggcgctgcccgccgccttcccgaacctgctggtg
aacggctcctctggcatcgcggtcggcatggcgacgaacatggcgccgcacaacctgcgc
gaggtgatcgcggccgcccgccacctgatcaagtacccgaacgcggacctggacgcgctg
atgaagcacgtcccgggcccggacctgcccaccggcggccggatcgtcggcctggacggc
atccgggacgcgtacgcgacgggccgcggcaccttcaagatgcgcgcgacggtctcgatc
gagacggtgaccgcccgccgccagggcctggtcgtcaccgaactgcccttcacggtcggc
cccgagaaggtgatcgccaagatcaaggatctggtgaactcgaagaaggtccagggcatc
gccgacgtcaaggacctcaccgaccgcgagcacggactgcgcctggtcatcgagatcaag
aacggcttcgtgccggaggcgatcctggagcagctgtacaagctgaccccgatggaggag
tccttcggcatcaacaacgtggcgctggtggacggccagccgctcacgctgggcctgaag
gaactgctggaggtctatctcgaccaccgcttcgacgtcgtccggcgccgcagcgagttc
cgccgcaccaagcgccgcgaccggctgcacctggtcgagggcctgctgaccgcgctggtc
gacatcgacgaggtcatccggctcatccggtccagcgagaactccgcgcaggccaaggag
cgcctgatgcggcgcttctcgctgagcgaggtgcagacgcagtacatcctcgacacgccg
ctgcgccggctcaccaagtacgaccgcatcgagctggaggcggagaaggacaagctcacc
gcggagatcgaggagctgacccgcatcctggagtccgacgcggagctgcgcaagctggtc
tcggccgaactggccgcggtggccaagaagttcggcaccgaccggcgtacggtcctgctg
gagtccgcgggcgccccggtggccgtggtgccgctgcaggtggccgacgacccgtgccgg
gtgctgctgtcctcgaccgggctgctggctcgtacggcgaccgacgagccgttcccggag
caggcgggcgccaagcgcgtcaagcacgacgtgatcgtctcggcggtcccggcgaccgca
cgcggcgagatcggcgcggtgacctcggcgggccgcctgctgcggatcaacgtggtcgac
ctgccccagctgccggagaccgcggcggcaccgaacctgtccggaggcgcgccgctggcg
gagttcgtctccctggaggacgacgagacggtggtctgcctgaccacgctggacgagtcg
tccccgggcctggcgctcggcaccgagcagggtgtcgtcaagcgcgtggtgcccgactat
ccgtccagcaaggacgagttggaggtcatcacgctcaaggagggtgaccggatcgtcggc
gcggtggagctgcgcaccggcgaggaggacctggtcttcatcaccgacgacgcgcagctg
ctgcgcttccaggcgtccatcgtgcgtccgcagggccgcccggcgggcggtatggcgggc
atcaagctcgccgagggcgcgagggtcatctcgttcacggcggtcgacccggcggccgac
gccgtggtgttcacggtggcgggctcgcgcggcacgctggacgactcggtgcagacgacg
gccaagctgacgccgttcgaccagtacccgcgcaagggccgcgccacgggcggtgtgcgc
tgccagcggttcctcaagggcgaggactgcctgtcgctgggctgggcgggcccggttccc
gcgcgtgcggcgcagaagaacggcaccccggcggacctgccggagctggacccgcgccgg
gacggctcgggcacatcgctgccgaagacggtctcggtggtcgcggggccggtcttctag
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