Streptomyces fodineus: BFF78_12425 Help Entry BFF78_12425       CDS       T05140                                  Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism spun  Streptomyces fodineus Brite KEGG Orthology (KO) [BR:spun00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:spun03400]     BFF78_12425 Enzymes [BR:spun01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      BFF78_12425     5.6.2.6  RNA 3'-5' helicase      BFF78_12425 DNA repair and recombination proteins [BR:spun03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     BFF78_12425 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WH_Lhr WH4_Lhr DEAD WH3_Lhr WH2_Lhr Helicase_C ResIII AlkZ-like DUF6406 AAA_25 PhoH Motif Other DBs NCBI-ProteinID:  AOR31751 UniProt:  A0A1D7Y865 LinkDB All DBs Position 3076534..3081522 Genome browser AA seq 1662 aa AA seqDB search MVSSAHRALDGFSPATRGWFTGAFSAPTAAQAGAWQAIGAGSDVLVVAPTGSGKTLAAFL AALDQLASTPPPADPRKRCRVLYVSPLKALAVDVERNLRSPLTGIRQESVRLGLPEPEVR VGIRSGDTPAAERRALSTRPPDILITTPESLFLMLTSATRDALTGVETVILDEVHAVAGT KRGAHLALSLERLDELLPRPARRIGLSATVRPVDEVARYLSPRRKVEIVQPESGKEFDLS VVVPVEDMGELAGSPAADATEGAERPSIWPHVEERIADLVQAHRSTIVFANSRRLAERLC NRLNEIAYERATGETLEEHHSPAQLMGGSGAAQGAPPVIARAHHGSVSKEQRALVEEDLK AGRLPAVVATSSLELGIDMGAVDLVVQVESPPSVASGLQRVGRAGHQVGAVSTGVVFPKY RGDLVQAAVVTERMRSGSIESLKVPANPLDVLAQQLVAMTALDTWQFDDLLALARRAAPF ASLPESAFTAVLDMLAGRYPSDAFAELRPRVVWDRVTGEITGRPGAQRLAVTSGGTIPDR GLFGVFLAGSDPKKGGGRVGELDEEMVYESRVGDVFTLGTSSWRIEDITRDRVLVSPAPG VPGRLPFWKGDQLGRPLELGRAVGAFLREVGSLPKDDARPRLLAAGLDAWAADNVLSYLD EQREACGHVPDDRTIVVERFRDELGDWRVVVHSPFGAQVHAPWALALGARLSERYGMDAQ VMHADDGIVLRLPDADLLGLDLLDQEPVKAGSEYDSEQAPVGAADVSFDKGEVDQIVTDQ VGGSALFASRFRECAARALLLPRRTPGKRTPLWQQRQRAAQLLQVASEFGSFPIVLEAVR ECLQDVFDVPGLVELMGDIESRKVRLVEVTTPEPSPFARSLLFGYVAQFLYEGDSPLAER RAAALSLDSRLLAELLGQAELRELLDAEVLTELERELQWLTEDRRVKDVEGVADVLRLLG PLSDAELAERGADPQWARELAGARRAIKVRIAGADHWAAVEDAGRLRDALGTALPVGVPE AFTEPVKDPLGDLLARYARTHGPFTSATAAARFGLGVAVTEGALQRLAANGRVVQGEFHP AGIGQEWCDAAVLRRLRRRSLAALRHELEPVPPAALAQFLPQWQHIGKGHGLRGIDGLVR AIEQLQGASVPASALEKLVLPSRVANYTPSMLDELTSAGEVVWTGAGALPGKDGWVCLYL ADAAPVLLPPPHPLELTALHRSVLDALSGGYGLFFRQIADQVRATTHPDVTDPQLADSLW DLAWSGRLTNDTLAPMRSLLGSGRTAGSTAHRAKRSVPRGRYGSLTAAARTASRTGPPTV AGRWSLLPSAEPDTTVRAHALARTLLDRHGVVTRGAVAAEGIEGGFSAVYRVLSAFEESG QARRGYVVEGLGAAQFAMDGAVDRLRAVSNARDRNEGLPTPRQNGFPGGPDGFAEPGFPN GFGGSNGTPHDRALPGAFEEGDSGFAHPGLDGDFTWPPADPPPAPGEYVSPRDLADPFAS PGYGGPRGGGAGAYGSPAHRGYGGGRTSTSSPDPRAVVLAAADPANAYGAALSWPEPPTG AGHKPGRKAGSLVVLVEGELTLYMERGGKTLLAWPAAPDTAAPDDPRLRTAAEVLAAAAR AGSLGTVTVERINGAQALTSPIGALLEGAGFVATPRGLRLRA NT seq 4989 nt NT seq  +upstreamnt  +downstreamnt atggtcagctccgcacatcgagccctcgacggcttctcccccgcgacccgcggctggttc acgggggcgttctccgcgcccaccgcggcccaggccggcgcgtggcaggccatcggcgcg ggctcggacgtgctggtggtggccccgaccggctcgggcaagacgctggccgcgttcctc gccgccctggaccagctggcctcgacgccgcccccggccgacccgaggaaacgctgccgg gttctgtacgtgtccccgctgaaggccctcgcggtcgacgtcgagcgcaacctccgcagt ccgctgaccggcatccgccaggagtccgtgcgcctgggcctgcccgagcccgaggtccgg gtcggcatccgctccggcgacaccccggcggccgagcgccgcgccctgtccacccgcccg ccggacatcctgatcaccacccccgagtcgctgttcctgatgctgacgtcggccacgcgc gacgcgctgacgggtgtggagacggtgatcctggacgaggtgcacgcggtcgcgggcacc aagcgcggcgcccatctcgcgctctccctggagcggctcgacgagctgctgccgcggccg gcccgccggatcggtctgtcggcgaccgtccgcccggtggacgaggtggcccggtatctc tcgccgcgccgcaaggtggagatcgttcagccggagtccggcaaggagttcgacctgtcc gtggtcgtcccggtcgaggacatgggcgagctggcaggctccccggcggcggacgcgacc gagggcgccgagcggccgtcgatctggccgcacgtggaggagcggatcgccgacctggtc caggcccaccgctccacgatcgtgttcgccaactcccggcgcctggccgagcggctgtgc aaccggctcaacgagatcgcctacgagcgggcgaccggcgagaccctggaggagcaccac tccccggcccagctgatgggcggctcgggcgccgcccagggcgcgcccccggtgatcgcc cgcgcgcaccacggctcggtctccaaggagcagcgcgccctggtcgaggaggacctgaag gcgggccggctgcccgccgtggtcgccacgtccagcctggagctgggcatcgacatgggc gccgtcgacctggtcgtgcaggtcgagtccccgccctcggtcgcctccgggctgcagcgc gtcggccgcgcggggcaccaggtgggggccgtctccaccggtgtcgtcttccccaagtac cgcggcgacctcgtccaggcggccgtggtcaccgagcggatgcgctcgggctcgatcgag tccctgaaggtgcccgcgaacccgctggacgtgctcgctcagcaactggtcgcgatgacg gcgctggacacctggcagttcgacgacctgctcgccctggcccgccgtgcggcacccttc gcctcgctgcccgagtcggcgttcacggcggtcctcgacatgctcgcgggccgctatccg tcggacgcgttcgcggagctgcgcccgcgcgtggtgtgggaccgagtgaccggcgagatc accggccgtccgggcgcccagcgcctcgccgtcacctcgggcggcacgatccccgatcgc ggcctgttcggggtcttcctcgccggttccgaccccaagaagggcggcggccgggtcggc gagctggacgaggagatggtctacgagtcccgggtcggtgacgtcttcacgctgggcacg agttcctggcgcatcgaggacatcacccgcgaccgggtcctggtctcccccgcgccgggc gtgccgggccggctccccttctggaagggcgaccagctgggccgcccgctcgaactgggc cgcgcggtgggcgcgttcctgcgcgaggtcggctcgctccccaaggacgacgcccggccg cgcctgctggcggcgggcctggacgcctgggccgcggacaacgtgctgtcgtacctggac gaacagcgggaggcctgcgggcatgtcccggacgaccgcacgatcgtcgtggagcgcttc cgcgacgagctgggcgactggcgggtcgtcgtccactcccccttcggcgcccaggtccac gccccctgggccctcgccctcggcgcccgcctgtccgagcggtacggcatggacgcgcag gtcatgcacgccgacgacggcatcgtgctgcgcctgcccgacgccgacctgctgggcctg gacctgctcgaccaggagcccgtgaaggccggctcggagtacgacagcgagcaggcaccc gtcggcgcggcggacgtctccttcgacaagggcgaggtcgaccagatcgtcaccgaccag gtcggcggctccgcgctgttcgcctcccggttccgtgagtgcgccgcccgtgcgctgctg ctcccgcgccgcacccccggcaagcgcaccccgctgtggcagcaacgccagcgtgcggcc caactgctccaggtggcgagcgagttcgggtcattcccgatcgtcctggaggcggtccgc gagtgcctccaggacgtcttcgacgtccccgggctggtcgagctgatgggtgacatcgag tcccgcaaggtgcgcctggtcgaggtcaccaccccggagccgtccccgttcgcccgctcc ctgctgttcgggtacgtggcccagttcctgtacgagggcgactcgcccttggccgagcgc cgggccgccgctctgtccctggactcccggctgctggccgagctgctgggccaggcggag ctgcgtgaactgctcgacgccgaggtgctgaccgagctggagcgcgagctgcagtggctc accgaggaccgccgggtcaaggacgtggagggcgtggccgatgtactgcggctgctcggc ccgctgagcgacgccgagctggccgagcggggcgcggacccgcagtgggcgcgggagctg gcgggtgcccgccgggccatcaaggtccggatcgcgggcgccgaccactgggcggcggtc gaggacgcgggccggctgcgcgacgcgctcggcacggcactgccggtcggcgtgcccgag gccttcaccgagccggtcaaggatccgctgggcgatctcctcgcccgttacgcccgcacc cacggcccgttcacgtcggccacggcggcggcccgtttcggcctgggcgtggcggtcacc gagggcgccctgcagcggctcgccgcgaacggccgggtggtgcagggcgagttccacccg gcgggcatcggccaggagtggtgcgacgcggccgtactgcgccgcctgcgccgccgctcc ctggcggccctgcggcacgaactggagcccgtgccgccggccgcgctcgcgcagttcctg ccgcagtggcagcacatcggcaaggggcacggtctgcgcggcatcgacggactggtgcgc gccatcgagcagttgcagggcgcctccgtgcccgcctccgcgctggagaagctggtcctg ccctcccgcgtggcgaactacacgccctcgatgctcgatgaactgacctcggccggcgag gtggtgtggacgggcgcgggcgccctgcccggcaaggacggctgggtctgcctctatctg gccgacgcggcgcctgtgctgctcccaccgccccaccccctggagctgaccgcgctccac cggtccgtcctggacgcgctctccggcggctacggcctgttcttccggcagatcgccgac caggtccgtgccaccacccaccccgacgtcaccgacccccaactggccgactcgctctgg gacctggcctggtcgggtcggctcaccaacgacaccctcgccccgatgcgctccctgctg ggctcgggccgtacggcggggtcgaccgcccaccgcgccaagcgcagcgtcccgcgcgga cgttacggctcgctgacggccgccgcgcgcaccgcctcgcgtacgggaccgccgaccgtc gccggccgctggtcgctgctgccctcggccgagccggacaccaccgtgcgtgcccacgcg ctggcccgcaccctcctggaccggcacggcgtggtcacccgtggggcggtcgccgcggag gggatcgagggcggcttctcggcggtctaccgcgtgctgtccgcgttcgaggagagcggc caggcgcggcgcggctatgtggtcgagggcctgggcgcggctcagttcgccatggacggg gcggtggaccggctccgcgcggtgtccaacgcccgggaccggaacgagggcctgcccacg ccccgccagaacggtttcccaggtggtcccgacggctttgccgagccgggcttcccgaac ggcttcggcggaagcaacggcaccccgcacgaccgagcccttcccggcgccttcgaggaa ggcgacagcggattcgcccaccccgggctcgacggtgacttcacctggccaccggcggac cccccgcccgcccccggcgagtacgtctcgccgcgcgacctcgccgacccctttgcctcc cccggctacggcggcccccgaggaggcggagccggcgcctacggctcaccggcgcaccgc gggtacggcggcggtcgtacgagcacgtcctcgcccgacccccgtgccgtggtcctcgcc gcggccgaccccgcgaatgcctacggcgcggcgctctcctggcccgagccaccgaccggt gccgggcacaagccgggccgcaaggcgggctcgctggtcgtcctggtggagggcgagctg acgctgtacatggagcgcggcggcaagacactgctggcctggcccgccgccccggacacg gcggccccggacgacccccgcctgcgtacggccgccgaggtcctggccgccgcggcccgc gcgggctccctcgggacggtcacggtcgagcggatcaacggcgcccaggccctgacctcc cccataggcgcgctgctggaaggagccggcttcgtggccacaccgcgcggcctgcgcctg agagcgtga

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