Streptomyces fodineus: BFF78_12970
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Entry
BFF78_12970 CDS
T05140
Name
(GenBank) RNA polymerase sigma factor WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
spun
Streptomyces fodineus
Pathway
spun02020
Two-component system
spun02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
spun00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BFF78_12970
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BFF78_12970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spun03021
]
BFF78_12970
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
spun02035
]
BFF78_12970
Transcription machinery [BR:
spun03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BFF78_12970
Bacterial motility proteins [BR:
spun02035
]
Flagellar system
Flagellar assembly proteins
Stator
BFF78_12970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
UPF0122
HTH_23
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AOR31838
UniProt:
A0A1D7Y879
LinkDB
All DBs
Position
complement(3218144..3218986)
Genome browser
AA seq
280 aa
AA seq
DB search
MPQHTSGSDRAAIPPAARDGGSVRPPAPSTLDELWRSYKATGDDRLREQLILHYSPLVKY
VAGRVSVGLPPNVEQADFVSSGVFGLIDAIEKFDIDREIKFETYAITRIRGAMIDELRAL
DWIPRSVRQKARNVERAYATLEARLRRTPTEGEVAAELDMEVDELHAVFSQLSLANVVAL
EELLHVGSEGGDRLSLMDTLEDTAADNPVEVAEDRELRRFLARAINTLPEREKTVVTLYY
YEGLTLAEIGNVLGVTESRVSQIHTKSVLQLRAKLASFGR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcacacctccgggtccgaccgggcggcgatccccccagccgcccgcgacggt
ggcagcgtgcggccgcccgctccctcgacgctcgacgagctgtggcggtcgtacaaggcg
acgggggacgaccggctgcgggagcagctgatcctgcactactcgccgctcgtgaaatac
gtcgcgggccgggtcagcgtcggtctgccgcccaatgtggagcaggccgacttcgtctcc
tccggcgtcttcgggctgatcgacgcgatcgagaagttcgacatcgaccgggagatcaag
ttcgagacgtacgcgatcacccggatccggggcgcgatgatcgacgagctgcgggcgctc
gactggattccccggtcggtgcggcagaaggcgcggaacgtggagcgggcctacgccacc
ctggaggcgcggctgcgccgcaccccgaccgagggcgaggtcgccgcggagctggacatg
gaggtcgatgagctgcacgccgtgttcagccagttgtcgctggccaacgtggtagcgctg
gaggagctgctgcacgtcggcagcgagggcggggaccggctcagcctcatggacacgctg
gaggacaccgccgccgacaacccggtggaggtcgccgaggaccgcgagctgcgccgcttc
ctcgcacgggcgatcaacacgctgcccgagcgggagaagaccgtggtcacgctgtactac
tacgaagggctcaccctcgccgagatcggtaacgtcctcggggtcaccgagagccgggtc
agccagatccacaccaagtcggtactgcagttgcgggccaagctggcgagcttcggccgc
tga
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