Streptomyces fodineus: BFF78_13155
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Entry
BFF78_13155 CDS
T05140
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
spun
Streptomyces fodineus
Pathway
spun03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spun00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
BFF78_13155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spun03019
]
BFF78_13155
03009 Ribosome biogenesis [BR:
spun03009
]
BFF78_13155
03036 Chromosome and associated proteins [BR:
spun03036
]
BFF78_13155
Enzymes [BR:
spun01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
BFF78_13155
Messenger RNA biogenesis [BR:
spun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BFF78_13155
Ribosome biogenesis [BR:
spun03009
]
Eukaryotic type
90S particles
RNase
BFF78_13155
Prokaryotic type
rRNA processing factors
BFF78_13155
Chromosome and associated proteins [BR:
spun03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
BFF78_13155
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AOR31875
UniProt:
A0A1D7Y8E1
LinkDB
All DBs
Position
complement(3257607..3258452)
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AA seq
281 aa
AA seq
DB search
MSSPKKAEDAKADAPAKKKADNQASSHTLLEGRLGYEVESALLVRALTHRSYAYENGGLP
TNERLEFLGDSVLGLVVTDTLYRIHPDLPEGQLAKLRAAVVNSRALAEVGRGLDLGSFIR
LGRGEEGTGGRDKASILADTLEAVIGAVYLDQGLDSASELVHRLFDPLIEKSSNLGAGLD
WKTSLQELTATEGLGVPEYLVTETGPDHEKTFTAAARVGGVSYGTGTGRSKKEAEQQAAE
SAWRSIRAAADERAKAAKEAKKAAEEAKEAVQDGESSSAPA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
gtgtccagtcccaagaaggcggaagacgccaaggcggacgcacccgccaagaagaaggcg
gacaaccaggcctcgtcccatacgcttctggaagggcggctcggctatgaggtcgagtcc
gcccttctggtgcgcgcgctgacccaccgttcctacgcgtacgagaacggcggtctgccg
acgaacgagcggctggagttcctcggtgactccgtcctcggcctcgtcgtcacggacacg
ctgtaccgcatccaccccgacctgcccgagggccagctggccaagctgcgggccgcggtg
gtcaactcgcgtgcgctggcggaggtcggccgcggcctcgacctgggctccttcatccgg
ctcggccgcggtgaagagggcacgggcggccgggacaaggcgtccatcctcgccgacacc
ctggaagcggtgatcggcgcggtctatctcgatcagggcctcgattcggcgtccgagctg
gtgcaccggctcttcgacccgctgatcgagaagtcctcgaacctcggtgccggcctggac
tggaagaccagtctccaggagctcaccgcgacggagggtctcggcgtgcccgagtacctg
gtcacggagaccggccccgaccacgagaagaccttcactgctgccgcccgcgtcggaggc
gtctcgtacggcaccggcaccggccgcagcaagaaggaggcggagcagcaggccgccgag
tccgcctggcggtccatccgggccgccgcggacgagcgcgccaaggcggccaaggaggcc
aagaaggccgccgaggaggccaaggaagctgtccaggacggcgagtcgtcgtccgctccc
gcctga
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