KEGG   Streptomyces fodineus: BFF78_13260
Entry
BFF78_13260       CDS       T05140                                 
Name
(GenBank) DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
spun  Streptomyces fodineus
Brite
KEGG Orthology (KO) [BR:spun00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spun03032]
    BFF78_13260
   03036 Chromosome and associated proteins [BR:spun03036]
    BFF78_13260
   03400 DNA repair and recombination proteins [BR:spun03400]
    BFF78_13260
DNA replication proteins [BR:spun03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    BFF78_13260
Chromosome and associated proteins [BR:spun03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    BFF78_13260
DNA repair and recombination proteins [BR:spun03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      BFF78_13260
SSDB
Motif
Pfam: Bac_DNA_binding HC2
Other DBs
NCBI-ProteinID: AOR31894
UniProt: A0A1D7Y8R9
LinkDB
Position
complement(3279018..3279665)
AA seq 215 aa
MNKAQLVEAIADKVGGRQQAAEAVDHVLDAIVRAVVAGERVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPRGGEVSVKKAPKGSLTGGAAATVKK
AAAKKTTKAAAKKVTAKKAAPAKKAAAAKKVTAKKAPAKKTTAAAKTAAAKKTTAKKATA
KKAPAKKVTAKKAPAKKSTARKTTAKKATARKATS
NT seq 648 nt   +upstreamnt  +downstreamnt
gtgaacaaggcgcagctcgtagaagcgattgccgacaaggtgggtggccgccagcaggcc
gccgaagccgtcgatcatgtcctggacgccattgtccgcgcggtcgtcgcgggcgagcgg
gtctcggtcaccggcttcgggtccttcgagaaggtggaccgtcccgcccgttacgcccgc
aaccctcagacgggagagcgggttcgggtcaagaagacctccgtgccgcgcttccgcgcg
gggcagggcttcaaggacctggtgagcggctcgaagaagctgccgcgcggtggcgaggtc
tcggtcaagaaggcgcccaagggcagcctgaccggcggcgccgctgcgacggtcaagaag
gccgccgcgaagaagaccaccaaggcggccgcgaagaaggtcacggccaagaaggcggcg
ccggcgaagaaggcggccgccgcgaagaaggtcacggcgaagaaggcgcccgccaagaag
accacggcggccgccaagaccgccgcggcgaagaagaccaccgccaagaaggcgacggcc
aagaaggctccggcgaagaaggtcaccgcgaagaaggccccggccaagaagtcgacggcc
cgcaagaccaccgccaagaaggcgacggcccgcaaggcgacgtcgtaa

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