Streptomyces fodineus: BFF78_14390
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Entry
BFF78_14390 CDS
T05140
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
spun
Streptomyces fodineus
Pathway
spun03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
spun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BFF78_14390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spun03400
]
BFF78_14390
DNA repair and recombination proteins [BR:
spun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BFF78_14390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
AOR37070
UniProt:
A0A1D7YNF3
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All DBs
Position
complement(3531957..3533015)
Genome browser
AA seq
352 aa
AA seq
DB search
MRSIWNGAISFGLVSIPIKLVNATESHSISFRQIHTEDGGRIRYRKFCELEEREVSGTEI
GKGYEDADGTIIPISDEDLSHLPIPTARTIEIVAFVPADRIDPLQMDAAYYLAASGTPAA
KPYTLLREALKRSNKVAIAKYALRGRERLGMLRVVGDAIAMHGLLWPDEVRAPEGVAPDA
SVTIRDKELDLADALMDTLGEVDLEDLHDEYREALEEVIAAKAAGEAPPEAPAPAAGGKV
LDLMAALENSVRAARESREATAGGEAEVRPLPPRAAPKAAGGKKSTSTAKKAAATAAKKA
APARKSTSKAAQGAGAGAGAGAKKTAGSKAAGKKAAASKSTAKKTASRRRTA
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
gtgcgatccatatggaacggcgcgatctccttcgggctcgtcagcattccgatcaagctg
gtgaacgccaccgagagccattcgatctccttccgccagatccacaccgaggacggcggc
cgcatccgctaccgcaagttctgcgagctggaggagcgcgaggtcagcggcacggagatc
ggcaaggggtacgaggacgcggacggcacgatcatcccgatcagcgacgaggacctctcc
cacctgccgatcccgaccgcccgcacgatcgagatcgtggccttcgtgccggccgaccgg
atcgacccgctccagatggacgcggcgtactacctggcagcctccggcacgccggccgcg
aagccgtacacgctgttgcgcgaggccctgaagcgcagcaacaaggtggccatcgcgaag
tacgccctgcgcggccgcgaacgcctcggcatgctccgggtggtcggcgacgccatcgcc
atgcacggcctgctgtggccggacgaggtccgcgcccccgagggtgtggcccccgacgcc
tccgtcaccatccgcgacaaggaactcgacctcgcggacgccctgatggacaccctcggc
gaggtcgacctggaggatctgcacgacgagtaccgagaggcgctggaggaggtcatcgcc
gcgaaggccgccggcgaggcaccccctgaggcacccgcgccggcggccgggggcaaggtc
ctggacctgatggcggccctggagaacagcgtgcgagcggcacgggagtcccgcgaggcg
acggccggcggcgaggccgaggtcagacccttgccgccgagggctgcgcccaaggcggcc
gggggcaagaagtcgacgtccacggcgaagaaggcggccgccacggccgcgaagaaggcg
gcaccggcccggaagtcgacgtccaaggcggctcagggggccggggccggggcgggagcc
ggagcgaagaagacggcgggttccaaggcggcgggcaagaaggcggcggcttcgaagagt
acggcgaagaagacggcgtcgcggaggcggacggcttga
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