Streptomyces fodineus: BFF78_15030
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Entry
BFF78_15030 CDS
T05140
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
spun
Streptomyces fodineus
Pathway
spun03420
Nucleotide excision repair
spun03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BFF78_15030
03430 Mismatch repair
BFF78_15030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spun03400
]
BFF78_15030
Enzymes [BR:
spun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BFF78_15030
DNA repair and recombination proteins [BR:
spun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BFF78_15030
MMR (mismatch excision repair)
Other MMR factors
BFF78_15030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
C1_1
Viral_helicase1
Zn_ribbon_TiaS
DUF6011
Motif
Other DBs
NCBI-ProteinID:
AOR32203
UniProt:
A0A1D7Y9A4
LinkDB
All DBs
Position
complement(3666232..3668370)
Genome browser
AA seq
712 aa
AA seq
DB search
MLEGLDPEQRAVATALHGPVCVLAGAGTGKTRAITHRIAYGVRAGILQPSSVLAVTFTNR
AAGEMRGRLRQLGAHGVQARTFHSAALRQLQYFWPKAIGGGMPRLIDRKIQLVADAAASL
GTRLDRGELRDVTAEIEWSKVTQTIPADYPYAAAKAGREVPRDPAEIAHLYAAYEDLKRD
RAVIDFEDVLLLTVAILQDRHDIAEQVRAQYQHFVVDEYQDVSPLQQRLLELWLGDRDNL
CVVGDASQTIYSFTGATPDHLLDFRTRHPGATVVKLVRDYRSTPQVVHLANGLLAQARGR
AADHRLELVSQRTPGPEPVYTEYTDEPAEAEGAARRIRELIDAGVPAAEIAVLFRTNAQS
ETYEQALADAGVPYQLRGAERFFDRPEVRKAGIALRGAARFGGNDSLLDDAVDLPSQVRA
VLSGEGWTTEPPAGSGVVRERWESLAALVNLAQDLAAAKPGAALGDFVTELDERANAQHA
PTVQGVTLASLHAAKGLEWDVVFLAGIAEGMLPITYARTDEQIEEERRLLYVGVTRARER
LHVSWALSRSPGGRPNRRPSRFLDGLRPGTTATVGHTGGGGTGGVERGTVAGTATAPRRA
QRTPARCRVCGRTLTEAGEMKLMRCEDCPSDMDEGLYERLREWRAVQAERSGQPDFCVFT
DRTLMAIAEARPESSAELSRIPGVLSRKLRSYGTDVLAICAGHDVGDADEDD
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgaagggctcgaccccgagcagcgcgcggtggccaccgccctgcacggcccggtg
tgcgtcctcgccggagcgggcacgggcaagacccgggcgatcacccaccgcatcgcctac
ggagtgcgcgccggaatcctccagccctccagcgtgctcgccgtcaccttcaccaaccgc
gccgcaggagagatgcgcggccggctgcgccagctcggcgcgcacggcgtccaggcccgc
accttccactccgctgccctgcgccagctgcagtacttctggccgaaagcgatcggtggc
ggcatgccccggctcatcgaccgcaagatccagctcgtcgccgacgccgccgcaagcctg
ggcacccggctcgaccggggcgagctgcgggacgtcaccgccgagatcgaatggtccaag
gtcacccagaccatccccgccgactacccgtacgcggctgcgaaggctggccgcgaggtc
ccgcgcgaccccgccgagatcgcccatctctacgcggcctacgaagacctcaagcgcgac
cgcgcggtgatcgacttcgaggacgtcctgctcctgaccgtcgccatcctccaggaccgg
cacgacatcgccgaacaggttcgcgcgcagtaccagcacttcgtcgtcgacgaataccag
gacgtcagccccctgcagcagcggctgctggagctgtggctcggcgaccgcgacaacctg
tgcgtcgtcggcgacgccagccagaccatctactcgttcacgggagcaacacccgaccac
cttctcgacttccgcacccggcaccccggcgccaccgtcgtcaaactcgtccgcgactac
cgttccaccccccaggtggtccaccttgccaacggcctgctcgcccaggcccgcggccgc
gccgccgaccaccggctggaactggtctcccagcgcacccccggccccgagccggtctac
accgagtacaccgacgagcccgccgaggccgaaggcgccgcccgccgcatccgcgagctg
atcgacgcgggcgtcccggccgccgagatcgccgtcctgttccgtacgaacgcccagtcc
gagacctacgagcaggccctcgccgacgccggcgtcccctaccagctgcgcggcgccgag
cgcttcttcgaccggcccgaggtgcgcaaggccggcatcgccctgcgcggcgcggcccgc
ttcggcggcaacgactcccttctggacgacgccgtggacctgccctcccaggtgcgtgcc
gtcctgtccggagagggctggaccaccgagcccccggccggctccggcgtcgtcagagag
cgctgggaatccctcgccgccctggtcaacctcgcccaggacctcgccgcagccaagccc
ggcgccgccctcggcgacttcgtcacggaactggacgagcgggcgaacgcccagcacgcc
cccaccgtccagggcgtcaccctcgcctccctgcacgccgccaagggcctggagtgggac
gtcgtcttcctggccggcatcgccgagggcatgctgcccatcacctacgccaggaccgac
gagcagatcgaggaggaacgccggctcctctacgtcggtgtcacccgcgcgcgggaacgg
ctccatgtctcctgggcgctgtcccgctcgccgggcggccgtcccaaccgcagaccgagc
cgcttcctcgacgggctgcgtcccggcaccaccgccaccgtcggccacacgggcggcggc
ggcaccggaggcgtcgagcgcgggacagtcgcaggaaccgccaccgctccccggcgtgcc
cagcgcacccccgcccgttgccgggtctgcggccgcacgctcaccgaagcgggcgagatg
aaactgatgcgctgtgaggactgcccctcggacatggacgaagggctctacgaacggctg
cgcgagtggcgggcggtacaggccgagcgcagcggacagccggacttctgcgtcttcacc
gaccgcaccctgatggccatcgccgaggcccggcccgagagttccgccgagctgtcccgc
atccccggtgtcctcagccgcaagctgcgcagctacggaaccgacgttctggccatctgc
gcaggtcacgacgtcggggacgccgacgaggacgactga
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