Streptomyces fodineus: BFF78_17015
Help
Entry
BFF78_17015 CDS
T05140
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
spun
Streptomyces fodineus
Pathway
spun03420
Nucleotide excision repair
spun03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BFF78_17015
03430 Mismatch repair
BFF78_17015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spun03400
]
BFF78_17015
Enzymes [BR:
spun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BFF78_17015
DNA repair and recombination proteins [BR:
spun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BFF78_17015
MMR (mismatch excision repair)
Other MMR factors
BFF78_17015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
AOR32536
UniProt:
A0A1D7YAN3
LinkDB
All DBs
Position
complement(4124098..4126590)
Genome browser
AA seq
830 aa
AA seq
DB search
MSSLFDDSFLADLQAPRGREEEPPPPPEDDHTPEPLPDDLFGGKFDVPPDRDAYYRDGAP
RPALDAAALLEGLNDNQRAAVVHAGTPLLIVAGAGSGKTRVLTHRIAHLLAERHVHPGQI
LAITFTNKAAGEMKERVEQLVGPRAHAMWVMTFHSACVRILRRESKKLGFTSSFSIYDAA
DSKRLMALVCRDLDLDPKRFPPKSFSAKISNLKNELIDEEDFAAQATDGFEKTLAQAYAL
YQSRLREANALDFDDLIMTTVNLLRAFPDVAEHYRRRFRHVLVDEYQDTNHAQYALVREL
VGTGERSAEEGDTPPGEYDLPPAELCVVGDADQSIYAFRGATIRNILQFEEDYPNATTIL
LEQNYRSTQTILSAANAVIERNESRRPKNLWTNAGQGARITGYVADTEHDEAQFVADEID
RLVDAGEAKAGDVAVFYRTNAQSRVFEEVFIRVGLPYKVVGGVRFYERKEVRDVLAYLRV
LANPEDSVPLRRILNVPKRGIGERAEAMIDALAQRERISFPQALKRVDEAYGMAARSTNA
VKRFNTLMEDLRTIVESGAGAATVLEAVLERTGYLAELQASTDPQDETRIENLQELAAVA
LEFEQERGEGEAGTLADFLEQVALVADSDQIPDEDEEGSGVITLMTLHTAKGLEFPVVFL
TGMEDGVFPHMRALGQTKELEEERRLAYVGITRARERLYLTRSALRSAWGQPSYNPPSRF
LEEIPPTHVEWKRTGAAAPVSSGPASGIAASLSSTRSRSSASGASGFATRRASDKPVVSL
AVGDRVTHDQFGLGTVVAVSGVEDKAQATIDFGDGKPKRLLLRYAPVEKL
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagcttcctggcggacctccaggcccctcgtgggcgcgag
gaggagcccccgccgccgcccgaggacgatcacactccggagccgcttccggacgatctg
ttcggcgggaagttcgacgtgccgccggaccgggacgcctactaccgcgacggcgctccc
cggcccgcgctcgacgcggcggcgctcctggaggggctgaacgacaaccagcgcgccgcg
gtcgtgcacgccggtaccccgctgctcatcgtcgccggcgccggctccggcaagacccgc
gtgctcacccaccgcatcgcccacctgctcgccgagcggcatgtgcaccccggtcagatc
ctcgcgatcaccttcaccaacaaggccgcgggcgagatgaaggagcgcgtcgagcagctc
gtcggcccgcgcgcgcacgcgatgtgggtgatgaccttccacagcgcatgcgtgcgcatc
ctgcgccgcgagagcaagaagctcggcttcacgtcctcgttctcgatctacgacgccgcg
gactccaagcgcctgatggccctggtctgccgcgacctggacctcgaccccaagcgcttc
ccgccgaagtcgttcagcgccaagatcagcaacctgaagaacgagctgatcgacgaggag
gacttcgccgcccaggccaccgacggtttcgagaagaccctcgcccaggcctacgccctg
taccagtcgcggctgcgcgaggcgaacgccctcgacttcgacgacctgatcatgacgacg
gtcaacctgctgcgcgccttcccggacgtcgccgagcactaccgccgccgcttccgccac
gtcctggtcgacgagtaccaggacaccaaccacgcccagtacgcgctggtacgggaactc
gtcggcacgggggagcgttctgccgaggagggcgacaccccgcccggcgagtacgatctc
ccgcccgccgaactgtgtgtcgtcggtgacgcggaccagtcgatctacgccttccgaggg
gcgacgatccgcaacatcctccagttcgaggaggactacccgaacgcgacgacgatcctg
ctggagcagaactaccgctccacgcagaccatcctgtccgccgccaacgcggtcatcgag
cgcaacgagtcccgccgcccgaagaacctgtggaccaacgccggccagggcgcgcggatc
accggctatgtcgccgacaccgagcacgacgaggcgcagttcgtcgccgacgagatagac
cgcctggtcgacgcgggcgaggccaaggcgggcgacgtcgccgtcttctaccgcaccaac
gcccagtcccgtgtcttcgaagaggtcttcatccgcgtcggcctgccctacaaggtcgtc
ggcggtgtccgcttctacgagcgcaaggaggtccgggacgtcctggcctacctgcgcgta
ctcgccaaccccgaggactcggtgccgctgcgccgtatcctcaacgtgcccaagcggggc
atcggcgagcgcgcggaggcgatgatcgacgccctcgcccagcgcgagaggatcagcttc
ccgcaggcgctcaagcgcgtggacgaggcgtacggcatggccgcgcgctccaccaacgcg
gtcaagcggttcaacacgctgatggaggacctgcgcacgatcgtcgagtcgggcgcgggc
gccgcgaccgtcctggaggccgtgctcgaacgcaccggctatctcgccgagttgcaggca
tccaccgacccgcaggacgagacccgcatcgagaacctccaggagctcgcggcggtggcc
ctggagttcgagcaggagcgcggcgaaggcgaggccggtacgctggccgacttcctggag
caggtggcgctggtcgccgactccgaccagatccccgacgaggacgaggaaggctccggc
gtcatcaccctgatgaccctgcacaccgccaagggcctggagttcccggtcgtcttcctg
accggtatggaggacggcgtcttcccgcacatgcgcgccctcggccagaccaaggagctg
gaggaggagcggcgcctggcgtacgtcggcatcacgcgcgcgcgggagcggctctacctc
acgcggtcggcgctgcgcagcgcctggggccagccgtcgtacaacccgccctcccgcttc
ctggaggagatcccgcccacccatgtggagtggaagcggaccggagcggcggcgccggtg
tcctcgggcccggcgtccgggatcgcggcctcgctgtcctcgacccgctcgcgctcgtcg
gcatcgggtgcgtccgggttcgccacgcggcgggcctccgacaagccggtggtgtccctg
gccgtcggcgaccgggtcacccacgaccagttcgggctcgggacggtcgtcgcggtgtcg
ggcgtggaggacaaggcccaggcgacgatcgacttcggagacggcaagccgaagcggctg
ctgctgcggtacgcgccggtggagaagctgtag
DBGET
integrated database retrieval system
