Streptomyces fodineus: BFF78_17365
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Entry
BFF78_17365 CDS
T05140
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
spun
Streptomyces fodineus
Pathway
spun03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spun00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BFF78_17365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spun03021
]
BFF78_17365
03400 DNA repair and recombination proteins [BR:
spun03400
]
BFF78_17365
Enzymes [BR:
spun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BFF78_17365
Transcription machinery [BR:
spun03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BFF78_17365
DNA repair and recombination proteins [BR:
spun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BFF78_17365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AOR32595
UniProt:
A0A1D7YAD9
LinkDB
All DBs
Position
complement(4200929..4201951)
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQVGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgctcagcgtccctcgttgaccgaagaggtcgtcgacgagttccgctcccgg
ttcgtgatcgagccgctggagccgggcttcggttacaccctcggcaactccctccgccgg
acccttctgtcctccatccccggtgcggctgtcaccagcatccgcatcgacggtgtcctg
cacgagttcaccaccgtgccgggcgtcaaggaggacgtcaccgacctgatcctcaacatc
aagcagctggtcgtctcctcggagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggcccgggtctggtcaccgccgccgacatcgcgcccccggccggtgtcgaggtgcacaac
cccgacctggtcctcgccacgctcaacggcaagggcaagctggagatggagctgacggtc
gagcgcggccgcggttacgtctccgccgtgcagaacaagcaggtgggccaggagatcggc
cgtatcccggtcgactccatctactcgccggttctgaaggtcacgtacaaggtcgaggcc
acgcgtgtcgagcagcgcaccgacttcgacaagctgatcgtcgacgtcgagaccaagcag
gcgatgcgtccccgtgacgccatggcctccgccggtaagaccctggtcgagctgttcggt
ctcgcccgcgagctgaacatcgacgccgagggcatcgacatgggcccgtccccgacggac
gccgccctggccgccgacctcgcgctgccgatcgaggagctggagctcacggtccgttcc
tacaactgcctcaagcgcgagggcatccactccgtgggtgagctcgtggctcgttccgag
gccgacctgctcgacatccgcaacttcggtgcgaagtcgatcgacgaggtcaaggcgaag
ctggccggcatgggcctggccctcaaggacagcccgcccggattcgacccgaccgccgcc
gccgacgccttcggcgccgacgacgacgcggacgcgggtttcgtggagaccgagcagtac
tga
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