Streptomyces fodineus: BFF78_17560
Help
Entry
BFF78_17560 CDS
T05140
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
spun
Streptomyces fodineus
Pathway
spun03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spun00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BFF78_17560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spun03021
]
BFF78_17560
03400 DNA repair and recombination proteins [BR:
spun03400
]
BFF78_17560
Enzymes [BR:
spun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BFF78_17560
Transcription machinery [BR:
spun03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BFF78_17560
DNA repair and recombination proteins [BR:
spun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BFF78_17560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AOR32632
UniProt:
A0A1D7YAP8
LinkDB
All DBs
Position
complement(4228884..4232369)
Genome browser
AA seq
1161 aa
AA seq
DB search
MAASRNASTANTNNGASTAPLRISFAKIKEPLEVPNLLALQTESFDWLLGNTAWQSRVEE
ALENGQDVPTKSGLEEIFEEISPIEDFSGSMSLTFRDHRFEPPKNSIDECKERDFTYAAP
LFVTAEFTNNETGEIKSQTVFMGDFPLMTNKGTFVINGTERVVVSQLVRSPGVYFDSTID
KTSDKDIFSAKIIPSRGAWLEMEIDKRDMVGVRIDRKRKQSVTVLLKALGWTTEQILEEF
GEYESMRATLEKDHTQGQDDALLDIYRKLRPGEPPTREAAQTLLENLYFNPKRYDLAKVG
RYKVNKKLGADEPLDAGVLTTEDVIATIKYLVKLHAGETETVTETGRTIMVETDDIDHFG
NRRIRSVGELIQNQVRTGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGTS
QLSQFMDQNNPLSGLTHKRRLNALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNI
GLIGSLASYGRVNAFGFIETPYRKVVDGQVSDEVDYLTADEEDRFVIAQANAPLNDEMRF
AEARVLVRRRGGEVDYVGPEDVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMMRQ
AVPLIKSEAPLVGTGMEYRSAVDAGDVVKAEKDGVVQEVSADYITTANDDGTYITYRLAK
FSRSNQGTSVNQKVIVNEGDRVVTGQVLADGPATQNGEMALGKNLLVAFMPWEGHNYEDA
IILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLADLDERGIIRIGA
EVIAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGETGKVIGVRVFD
REEGDELPPGVNQLVRVYVAQKRKITDGDKLAGRHGNKGVISKILPIEDMPFLEDGTPVD
IILNPLGVPSRMNPGQVLEIHLGWLASRGWDVSGLADEWAQRLQAIGADQVAPRTNVATP
VFDGAREDELAGLLQHTIPNRDGERMVLPSGKARLFDGRSGEPFPDPISVGYMYILKLHH
LVDDKLHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDD
VTGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSSDGMSIEMRDTDEDVF
RAAEELGIDLSRREPSSVEEV
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
ttggccgcctcgcgcaatgcctcgaccgcgaatacgaacaacggcgccagcaccgccccg
ctgcgcatctcctttgcaaagatcaaggagcctctcgaggttccgaacctgctcgcgctg
cagaccgagagcttcgactggctgctcggcaacaccgcctggcagagtcgggtcgaggag
gctctggagaacggtcaggacgtccccaccaagtccggtctggaggagatcttcgaggag
atctccccgatcgaggacttctccgggtcgatgtccctgacgttccgggaccaccgcttc
gagccgccgaagaactccatcgacgagtgcaaggagcgcgacttcacgtacgccgccccg
ctcttcgtcaccgccgagttcaccaataacgagaccggtgagatcaagtcccagacggtc
ttcatgggcgacttcccgctcatgacgaacaagggcaccttcgtcatcaacggcaccgag
cgtgtcgtggtgtcccagctggtccgttcccccggtgtctacttcgactccaccatcgac
aagacgtccgacaaggacatcttctccgccaagatcatcccgtcccggggtgcctggctg
gagatggagatcgacaagcgcgacatggtcggtgtccgcatcgaccgcaagcgcaagcag
tcggtcaccgtgctgctgaaggcgctcggctggacgaccgagcagatcctcgaggagttc
ggcgagtacgagtccatgcgcgccaccctggagaaggaccacacccagggccaggacgac
gcgctgctcgacatctaccgcaagctgcgtccgggcgagccccccacgcgtgaggccgcg
cagacgctgctggagaacctgtacttcaaccccaagcgctacgacctcgccaaggtcggc
cgctacaaggtcaacaagaagctcggtgcggacgagccgctggacgccggcgtgctcacc
accgaggacgtcatcgccaccatcaagtacctggtgaagctgcacgccggcgagaccgag
acggtgaccgagaccggtcgcacgatcatggtcgagaccgacgacatcgaccacttcggc
aaccgccgtatccgcagcgtcggtgagctgatccagaaccaggtccgtacgggtctcgcc
cgtatggagcgcgtcgtgcgcgagcgcatgaccacccaggacgtcgaggcgatcacgcca
cagaccctgatcaacatccggccggtcgtcgcctccatcaaggagttcttcggcaccagc
cagctgtcccagttcatggaccagaacaacccgctgtcggggctgacgcacaagcgtcgt
ctgaacgccctcggcccgggtggtctctcccgtgagcgggccggcttcgaggtccgtgac
gttcacccgtcgcactacggccgtatgtgcccgatcgagacgccggaaggcccgaacatc
ggtctgatcggctcgctcgcctcctacggccgggtcaacgcgttcggtttcatcgagacg
ccgtaccgcaaggtcgtcgacggccaggtcagcgacgaggtcgactacctgaccgccgac
gaggaggaccgcttcgtcatcgcgcaggccaacgcgccgctgaacgacgagatgcggttc
gccgaggcccgcgtgctggtccgccgccgtggcggcgaggtcgactacgtcggccccgag
gacgtggactacatggacgtctcgccgcgccagatggtgtcggtcgcgaccgccatgatc
cccttcctcgagcacgacgacgccaaccgtgccctcatgggcgcgaacatgatgcgtcag
gccgtgccgctgattaagtccgaggcaccgctcgtcggcaccggcatggagtaccgctcc
gcggtcgacgccggcgacgtggtcaaggccgagaaggacggtgtggtccaggaggtctcc
gcggactacatcaccaccgccaacgacgacggcacgtacatcacgtaccgcctggccaag
ttctcccggtccaaccagggcacctcggtcaaccagaaggtcatcgtcaacgagggcgac
cgcgtcgtcaccggccaggtgctggccgacggcccggccacccagaacggcgagatggcc
ctcggcaagaacctgctcgtggcgttcatgccgtgggagggtcacaactacgaggacgcg
atcatcctgtcgcagcgcctcgtgcaggacgacgtcctctcctcgatccacatcgaggag
cacgaggtcgacgcccgtgacaccaagctcggccccgaggagatcacccgggacatcccg
aacgtctccgaggaggtcctcgccgacctcgacgagcgcggcatcatccgcatcggtgcc
gaggtcatcgccggtgacatcctcgtcggcaaggtcaccccgaagggtgagaccgagctg
acccccgaggagcgtctgctgcgcgcgatcttcggggagaaggcacgtgaggtccgtgac
acctcgctgaaggtgccgcacggcgagaccggcaaggtcatcggcgtccgcgtcttcgac
cgcgaggagggcgacgagctgccgccgggcgtgaaccagctggtccgcgtctacgtcgcg
cagaagcgcaagatcaccgacggcgacaagctcgccggccgtcacggcaacaagggtgtc
atctccaagatcctgccgatcgaggacatgccgttcctggaggacggcaccccggtcgac
atcatcctcaacccgctgggcgtgccgtcccgaatgaacccggggcaggtcctggagatc
cacctcggctggctcgccagccgcggctgggacgtctccggcctcgcggacgagtgggcc
cagcgcctgcaggccatcggcgccgaccaggtcgccccgcgcaccaacgtcgcgaccccg
gtcttcgacggtgcccgcgaggacgagctggcgggtctgctgcagcacaccatcccgaac
cgcgacggcgagcgcatggtgctcccgtccggcaaggcgcggctgttcgacggccgctcc
ggtgagccgttcccggacccgatctcggtcggctacatgtacatcctgaagctgcaccac
ctggtcgacgacaagctgcacgcccgctcgaccggtccgtactcgatgatcacccagcag
ccgctgggtggtaaggcccagttcggtggccagcgcttcggtgagatggaggtgtgggcc
ctcgaggcctacggcgccgcgtacgccctccaggagctgctgaccatcaagtccgacgac
gtcaccggccgcgtgaaggtctacgaggccatcgtcaagggcgagaacatccccgagccc
ggcatccccgagtccttcaaggtgctcatcaaggagatgcagtcgctctgcctgaacgtg
gaggtgctgtccagcgacggtatgtccatcgagatgcgtgacaccgacgaggacgtcttc
cgcgctgcggaggagctcggcatcgacctgtcccggcgcgagccgagcagcgtcgaagag
gtctga
DBGET
integrated database retrieval system
