Streptomyces fodineus: BFF78_19420
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Entry
BFF78_19420 CDS
T05140
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
spun
Streptomyces fodineus
Pathway
spun03030
DNA replication
spun03430
Mismatch repair
spun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BFF78_19420
03430 Mismatch repair
BFF78_19420
03440 Homologous recombination
BFF78_19420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spun03032
]
BFF78_19420
03400 DNA repair and recombination proteins [BR:
spun03400
]
BFF78_19420
Enzymes [BR:
spun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BFF78_19420
DNA replication proteins [BR:
spun03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BFF78_19420
DNA repair and recombination proteins [BR:
spun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BFF78_19420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNApol3-delta_C
AAA_5
DUF6587
Ribosomal_L12
Motif
Other DBs
NCBI-ProteinID:
AOR32944
UniProt:
A0A1D7YBP9
LinkDB
All DBs
Position
complement(4613953..4615158)
Genome browser
AA seq
401 aa
AA seq
DB search
MTVWDDLVGQEKVSAVLDAAARDADALVTAVAADEPLPEASKMTHAWLFTGPPGAGRNQT
ARAFAAALQCVSPDRALGGTPGCGFCDGCHTALLGTHADVTTVAAVGSEILVRDMRDTVR
KSFTSPANGRWQIILVEDAERLNEKSANAVLKAVEEPAPRTVWLLCAPSVEDVLPTIRSR
CRHLNLRTPSVDAVADMLVRRDGIEPEVAAAAARATQGHVDRARRLATDPAARERRAAVL
KLPLRLDEVGACLKAAQQLVDAAAEDAKQLAEEMDGKESEEMKAALGAAQGGRLPRGTAG
VMKDLEDMQKRRRTRTQRDSLDVALGDLTAFYRDVLALQLGSRVAIANADAEDALERLAR
GSVPESTLRRIEAIAACREALDRNVAPLLAVEAMTMALRAG
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtatgggacgacctcgtcgggcaggagaaggtgagcgcggtgctcgacgcggcc
gcgcgggacgccgacgccctcgtcacggccgtcgcggccgacgagccgctgcccgaggcc
tcgaagatgacgcacgcctggctgttcacgggcccgcccggagcgggccggaaccagacg
gccagggccttcgccgccgccctgcagtgcgtgagccccgaccgcgcactcggcggaacc
cccggctgcggcttctgcgacggctgccacaccgccctgctcggcacccacgcggacgtc
accacggtcgccgccgtcggctccgagatcctggtgagggacatgcgggatacggtccgc
aagtcgttcacctccccggcgaacggccgctggcagatcatcctggtcgaagatgccgag
cggctgaacgagaagtcggcgaacgccgtcctcaaggccgtcgaggagcccgccccccgc
acggtctggctgctgtgcgccccctccgtcgaggacgtcctgcccacgatccgctcccgc
tgccgccacctgaacctgcgcacaccctccgtggacgcggtcgccgacatgctcgtccgg
cgcgacggcatcgaacccgaggtcgcggcggcggcggcccgcgccacccagggacatgtc
gaccgggcccgccgcctggccaccgaccccgcggcccgcgagcgccgcgccgccgtgctc
aagctgccgctgcgcctcgacgaggtcggcgcctgcctcaaggccgcccagcaactggtc
gacgccgccgccgaggacgccaagcaactcgccgaggagatggacggcaaggagtccgag
gagatgaaggcggcgctgggcgcggcccagggcggccggctgccgcgcggcacggcgggc
gtgatgaaggacctggaggacatgcagaagcgccgcagaacccgcacgcagcgcgacagc
ctcgacgtcgccctcggcgacctcaccgccttctaccgcgacgtcctcgccctccagctc
ggctcccgcgtggcgatcgccaacgccgacgccgaggacgccctggagcggctggcgcgc
ggcagcgtcccggagtccacgctccgccgcatcgaggcgatcgccgcgtgccgcgaggcc
ctcgaccgcaacgtggccccgctgctggcagtggaggcgatgacgatggcactgcgggcg
ggctga
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