Streptomyces fodineus: BFF78_22100
Help
Entry
BFF78_22100 CDS
T05140
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
spun
Streptomyces fodineus
Pathway
spun00300
Lysine biosynthesis
spun00470
D-Amino acid metabolism
spun01100
Metabolic pathways
spun01110
Biosynthesis of secondary metabolites
spun01120
Microbial metabolism in diverse environments
spun01230
Biosynthesis of amino acids
Module
spun_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
spun00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BFF78_22100
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BFF78_22100
Enzymes [BR:
spun01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
BFF78_22100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
DUF4442
Invasin_D3
Motif
Other DBs
NCBI-ProteinID:
AOR33401
UniProt:
A0A1D7YCV9
LinkDB
All DBs
Position
complement(5211301..5212101)
Genome browser
AA seq
266 aa
AA seq
DB search
MRFRKMHGAGNDFVLLCDPSPDDDMDWPKEAERLCARRIGVGADGLVISRLVSKDPAVLE
VTCFNSDGSLATMCGNALRCSAWAAHRDHGFQQMSLRMAGVEHEAVVSDDSVWVTAEVGE
ILPRRLQTTINGRPTWFDSAHTGTEHVVAIVDDVEAIDAVIVGRLVRHHAGLAPLGTNVN
FVQSAGSQALKIRTYERGVEAETLSCGSGAVAAAVIATMRGLVARRAVTVHNRAGEPLTV
RPHDARPNRTQWVGGPVTNTFEGVLA
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttcgcaagatgcacggtgcaggaaacgacttcgtcctgctctgcgacccctcc
ccggacgacgacatggactggcccaaggaggcggagcgcctgtgcgccaggcgtatcggc
gtcggcgcggatgggctcgtgatcagccgactggtcagcaaggaccccgccgtcctcgaa
gtcacctgcttcaactcggacggctcgctcgcaacgatgtgcggcaacgccctgcgatgc
tccgcctgggccgcgcaccgcgatcacggcttccagcagatgagtctccgcatggccgga
gtggagcacgaggcggtcgtctcagatgactccgtgtgggtcacggccgaggtgggagag
atcctcccccggcgcttacagacgaccatcaacggcaggccgacctggttcgacagcgcc
cacaccggcacggaacacgtcgtggccatcgtggacgacgtggaggccatcgatgcggtg
atcgtcgggcgcctcgtccgtcaccacgccggccttgccccgctgggcacgaacgtcaac
ttcgttcaatccgccggcagccaggcgctgaagatccgcacctacgaacgcggcgtcgag
gcggaaaccctgtcatgcggaagcggggcagtcgcagccgcagtcatcgccaccatgcgc
gggctggtcgcacgccgcgccgtcacggtccacaaccgcgccggagagccgctcacggtc
cggccacacgacgcccggccgaaccggactcagtgggtcggcgggccggtcaccaacacc
ttcgaaggggtactcgcatga
DBGET
integrated database retrieval system