Streptomyces fodineus: BFF78_22240
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Entry
BFF78_22240 CDS
T05140
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
spun
Streptomyces fodineus
Pathway
spun03030
DNA replication
spun03430
Mismatch repair
spun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BFF78_22240
03430 Mismatch repair
BFF78_22240
03440 Homologous recombination
BFF78_22240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spun03032
]
BFF78_22240
03400 DNA repair and recombination proteins [BR:
spun03400
]
BFF78_22240
Enzymes [BR:
spun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BFF78_22240
DNA replication proteins [BR:
spun03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BFF78_22240
DNA repair and recombination proteins [BR:
spun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BFF78_22240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
RuvB_N
AAA_22
Rad17
AAA_30
AAA_14
zf-CXXC
AAA_5
AAA_18
AAA_19
AAA_16
nSTAND3
Mg_chelatase
AAA_28
TsaE
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
AOR33423
UniProt:
A0A1D7YCS6
LinkDB
All DBs
Position
5238428..5240887
Genome browser
AA seq
819 aa
AA seq
DB search
MSSLALYRRYRPETFAEVIGQEHVTDPLQQALRNNRVNHAYLFSGPRGCGKTTSARILAR
CLNCEQGPTPTPCGECQSCRDLARNGPGSIDVIEIDAASHGGVDDARELREKAFFGPASS
RYKIYIIDEAHMVTSAGFNALLKVVEEPPEHLKFIFATTEPEKVIGTIRSRTHHYPFRLV
PPGTLRDYLAEVCQKETIRVEDGVFPLVVRAGAGSVRDSMSVMDQLLAGAREEGVTYAMA
TSLLGYTDGSLLDSVVEAFATGDGAAAFEVVDRVIEGGNDPRRFVADLLERLRDLVILAA
VPDAVEKGLIDAPADVLERMQAQASTFGAAELSRAADLVNAGLTEMRGANSPRLQLELIC
ARVLLPAAYGDERSVMARLDRLERGVHFSSGAGAPAMGYVPGPEAHGAGAPMPPAAAVPP
GGGPAAARAAVRAANGPGGGPAGASGAGPAVGGPGVGGVGDGGPGAGAGGAGVGGPGSGG
PGVGGPAAGGPGVGGPGVGSPAPTTAPAPAPTAPTPTAPTPPPAAAAPASQAPASPPTPP
ATPAPASAPPSAPAAAGAWPTAAAAGSGRRPGGWPTAAAPAGGAPQGQAPGRPSAAQQQA
PASPAAPAPAPPAGAPAGGLDPRMLWPNILEAVKNRRRFTWILLSQNAQVTGFDGTTLQL
GFVNAGARDNFASSGSEDVLRAALAEQFNVQWKIEAVVDPSGGGSAPQPAGGSGFGGGGG
YGAAPAAGGGGYGAPAAPRPAAPQPAPQAPTSPQPGRAAAPAAPTPAPQPPAAPEPPPVA
PEDDIPEDDDPDLDESALSGHELIVRELGATVVEEFSNE
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtctctcgcgctgtaccgccgctatcgcccggagacctttgccgaggtcatcggg
caggagcatgtcaccgacccgctgcagcaggcgctgcggaacaaccgggtcaatcacgcg
tacctgttcagcggtccgcgcggctgcggcaagacgaccagcgcgcggatcctcgcccgc
tgcctgaactgtgagcaaggtcccaccccgacgccgtgcggcgagtgccagtcctgccgg
gacctggcgcgcaacggcccaggctcgatcgacgtcatcgagatcgacgcggcctctcac
ggtggtgtggacgacgcccgtgagctgcgcgagaaggccttcttcggccccgcgagcagc
cgctacaagatctacatcatcgacgaggcccacatggtcacgtcggccggcttcaacgcg
ctgctgaaggtcgtggaggagccgccggagcacctgaagttcatcttcgcgaccaccgag
cccgagaaggtcatcgggacgatccggtcccggacccatcactaccccttccggctcgtg
ccgcccggcaccctgcgtgactacctcgccgaggtgtgccagaaggagaccatccgggtc
gaggacggcgtgttcccgctcgtcgtgcgggccggcgcgggctccgtgcgtgactccatg
tccgtcatggaccagctcctcgccggtgcccgtgaggagggtgtgacgtatgccatggcc
acctccctcctcggctacaccgacggctcccttctcgactccgtcgtcgaggccttcgcc
accggtgacggggccgccgccttcgaggtcgtggaccgcgtcatcgagggcggcaacgac
ccgcgccgcttcgtcgccgacctgctggagcggctccgggacctggtgatcctcgccgcc
gtgccggacgccgtggaaaaggggctcatcgacgccccggccgacgtcctggagcgcatg
caggcccaggcctccaccttcggtgccgccgagctgagccgcgccgccgacctcgtcaac
gccggcctgacggagatgcgcggcgccaactcgccccgcctccagctggaactgatctgc
gcgcgcgtgctgctcccggccgcctacggagacgagcggtccgtgatggcccgcctcgac
cgcctcgagcgcggcgtccacttctcgtccggcgccggcgcgcccgccatgggctacgtc
cccggccccgaggcccacggcgcgggcgcccccatgccgcctgctgctgccgtaccgccc
ggcggcggcccggcggcggcgcgcgcggctgtacgggcggccaatgggccggggggcggt
cctgccggtgcctcgggtgcgggtcctgcggttggtggtcctggcgtcggtggtgtgggc
gatggtggcccgggtgccggtgccggtggcgcaggtgtcggtggtccggggtccggtggt
ccgggcgttggcggtccggctgccggtgggcccggtgtcggcggccccggcgtcggcagt
ccggctccgacgaccgcccctgcccccgcgcctacggcccccacgcccaccgcccccacg
ccaccccccgcagccgctgcccccgcttcccaggccccggcgtcgcctcccacgcccccc
gctaccccggccccggccagcgctcccccctcggctcccgccgcagccggtgcctggccc
accgcggctgccgccggaagcggccggcgccccggtggctggcccacggcagcggcaccg
gcgggcggtgcaccgcagggccaggccccggggcgcccctcggccgcccagcagcaggcc
ccggcatcccctgcggccccggccccggccccgcccgcgggcgccccggcgggtggtctc
gacccccgcatgctctggccgaacatcctggaggccgtcaagaaccgccgccgcttcacc
tggatcctgctcagccagaacgcccaggtgaccggcttcgacggcaccaccctccagctc
ggcttcgtcaacgccggtgcccgcgacaacttcgcgagcagtggcagcgaggacgtgctg
cgggcggcgctggccgagcagttcaacgtgcagtggaagatcgaggcggtcgtcgacccg
tccggcggcggttccgcgccccagcccgcgggaggctcgggcttcggcggcggaggcggt
tacggcgccgctccggcagcgggcggcggtggctacggcgccccggccgccccccgcccc
gcggcaccccagccggccccacaggcccccacgtccccgcaaccgggccgcgcggccgcc
cccgcggcgcccacccctgccccccagccgcccgccgcccccgagccgccccccgtagcg
cccgaggacgacatcccggaggacgacgacccggacctcgacgagtcggccctctccggc
catgaactgatcgtgcgggaactgggggcgacggtggtggaggagttctccaacgagtag
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