KEGG   Streptomyces fodineus: BFF78_25020
Entry
BFF78_25020       CDS       T05140                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K03090  RNA polymerase sigma-B factor
Organism
spun  Streptomyces fodineus
Brite
KEGG Orthology (KO) [BR:spun00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spun03021]
    BFF78_25020
Transcription machinery [BR:spun03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BFF78_25020
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r3 Sigma70_r2 Sigma70_r4_2 HTH_23 HTH_24 HTH_Crp_2 HTH_3 Sigma70_ECF MarR_2 DUF7343 MarR IF2_N
Other DBs
NCBI-ProteinID: AOR33883
UniProt: A0A1D7YE43
LinkDB
Position
complement(5830107..5831012)
AA seq 301 aa
MSPRLDASHTPHTPIATSTPPPEQLDHAIDPLDPVEGLPEIPPYDEIGPVDARALSKTLF
ERLESLEEGTYEYSYVRNTLVELNLALVKFAASRFRSRSEPMEDIIQVGTIGLIKAIDRF
ELARGVEFPTFAMPTIIGEIKRFFRDTSWSVRVPRRLQELRLDLAKAGDELAQRLDRAPT
VPELAEKLGISNDEVVEGMAASNAYTASSLDAQPEEDETEGALADRIGYEDHGLEGIEYI
ESLKPLIAELPPRDRKILSLRFVANMTQSEIGEELGISQMHVSRLLSRTLVRLRKGLTIE
E
NT seq 906 nt   +upstreamnt  +downstreamnt
atgtcaccccggctcgacgcatcgcatacaccgcataccccgatcgcgacgtcgacaccc
ccaccggaacaactggatcatgccatcgatcccctcgaccccgtcgagggactcccggag
atccccccgtacgacgagatcggcccggtcgatgcgcgggccttgtccaaaaccctcttc
gagcgcctcgaatcgctggaggaagggacgtacgagtactcgtacgtccgcaacacgctc
gtcgagctgaacctcgcgctcgtcaagttcgccgcctcccgttttcgctcccgcagcgag
ccgatggaggacatcatccaggtcggcaccatcggcctgatcaaggcgatcgaccgcttc
gaactcgcgcgcggggtcgaattcccgaccttcgcgatgccgaccatcatcggcgagatc
aagcggttcttccgggacacctcgtggtccgtgcgcgtgccgcgcaggctgcaggagctg
cgcctggacctggccaaggccggggacgagctggcccagcggctggaccgcgccccgacc
gtccctgagctggccgagaagctcggcatctccaacgacgaggtcgtcgagggcatggcc
gcctcgaacgcctacaccgcctcctcgctggacgcccagcccgaggaggacgagaccgag
ggtgcgctggcggaccgcatcgggtacgaggaccacggcctcgagggcatcgagtacatc
gagtcgctcaagcccctgatcgccgaactcccgccccgggaccggaagatcctctccctg
cggttcgtggcgaacatgacccagtcggagatcggcgaggaactcggcatctcccagatg
cacgtctcccgcctgctctcgcgcacgctggtacggctgcgcaagggtctgacgatcgag
gagtga

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