Streptomyces fodineus: BFF78_26795
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Entry
BFF78_26795 CDS
T05140
Name
(GenBank) helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
spun
Streptomyces fodineus
Pathway
spun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BFF78_26795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spun03400
]
BFF78_26795
Enzymes [BR:
spun01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BFF78_26795
DNA repair and recombination proteins [BR:
spun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BFF78_26795
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
HHH_RecD2
AAA_30
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
AAA_22
PIF1
NAT10_TcmA_helicase
NPHP3_N
PhoH
AAA_16
TraI_hel_assoc_N
DEAD
nSTAND3
HTH_IclR
ABC_tran
AAA
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
AOR34179
UniProt:
A0A1D7YFS5
LinkDB
All DBs
Position
6233972..6236251
Genome browser
AA seq
759 aa
AA seq
DB search
MAQQAGTQTGERRLAVLEGVLERITYANEENGYTVARVDTGRGGGDLLTVVGALLGAQVG
ESLRMEGRWGSHAQYGKQFHVENYTTVLPATVQGIRRYLGSGLVKGIGPVFADRITQHFG
MDTLRVIEEEPKRLIEVPGLGPKRTRKIADAWEEQKAIKEVMLFLQTVEVSTSIAVRIYK
KYGDASISVVKDHPYRLAADVWGIGFLTADKIAQSVGIPHDSPERVKAGLQYALSQSADQ
GHCFLPEERLISDAVKLLAVDTGLVIECLAELAEPADDGDDPGVVREKVPGPDGDADRPV
TAVYLVPFHRAELSLSAQLLRLLRTDEDRMPAFRDVDWAKALGWLRGRTGADLAPEQEAA
VKLALSEKVAVLTGGPGCGKSFTVRSIVELARAKRAKVLLAAPTGRAAKRLAELTGAEAS
TVHRLLELKPGGDAAYDRDRPLDADLVVVDEASMLDLLLANKLVKAVPPGAHLLFVGDVD
QLPSVGAGEVLRDLLADGSPVPAVRLTRVFRQAQQSGVVTNAHRINAGQHPVTDGMKDFF
LFVEDDTEEAGRLTVDVAARRIPAKFGLDPRRDIQVLAPMHRGPAGAGALNGLLQQAITP
GRPDVPEKRFGGRVFRVGDKVTQIRNNYEKGKNGVFNGTVGVVTSLDPVDQRLTVLTDED
EEVPYEFDELDELAHAYAVTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRAKRLV
VLVGSRKAIGQAVRTVSAGRRCTALDFRLSTKNDRSNES
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacaggcggggacccagaccggtgagcggcggctcgccgtgctcgaaggtgtg
ctggaacgcatcacgtacgccaatgaggagaacggctacacggtcgcccgggtcgacacg
ggaagaggcggtggtgatctgctcacggtcgtcggcgcgctgctcggtgcccaagtcggt
gaatccctccgcatggaggggcggtggggttcgcacgcgcagtacggcaagcagttccac
gtcgagaactacacgaccgtgctgcccgccaccgtccagggcatccggcgttatctgggg
tccgggctggtcaaggggatcgggcccgtcttcgccgaccggatcacgcagcacttcggc
atggacacgctccgggtcatcgaggaggagcccaagcggctcatcgaggtgccggggctg
gggcccaagcggaccaggaagatcgccgacgcctgggaggagcagaaggcgatcaaggag
gtcatgctcttcctgcagaccgtcgaggtgtccacctcgatcgccgtgcggatctacaag
aagtacggggacgcgtcgatctccgtcgtcaaggaccatccctaccggctcgccgccgac
gtctggggcatcgggttcctcacggccgacaagatcgcccagtccgtcggcatcccgcac
gacagcccggagcgggtcaaggcggggctgcagtacgccctgtcgcagtccgccgaccag
gggcactgcttcctgccggaggagcggctgatctccgacgccgtgaagctgctcgccgtt
gacaccgggcttgtcatcgagtgcctcgccgagctggccgagccggcagacgacggtgac
gatcccggtgtcgtacgggagaaggtgcccggcccggacggtgacgccgaccggcccgtc
acggccgtgtacctcgtgcccttccaccgtgccgagctgtccctgtccgcccagctgctg
cgcctgctgcggacggacgaggaccggatgccggccttccgggacgtcgactgggcgaag
gccctcggctggctgaggggccgtaccggcgccgatctcgccccggagcaggaagccgcc
gtcaagctggcgctcagcgagaaggtcgccgtgctgacgggcgggcccggctgcggcaag
tccttcaccgttcgctcgatcgtggagctggcccgtgccaagcgggccaaggtgctgctg
gccgcccccaccgggcgggccgccaagcggctggccgagctgaccggcgccgaggcctcc
accgtgcaccggctgctggagctgaagcccggcggggacgccgcctatgaccgggaccgg
ccgctcgacgccgacctcgtcgtcgtggacgaggcctccatgctggatctgctgctggcc
aacaagctcgtcaaggccgtaccgcccggcgcccatctcctcttcgtcggggacgtggac
cagctgcccagcgtgggggccggggaggtgctccgtgacctgctcgccgacggcagcccc
gtcccggccgtccggctgacccgtgtcttccggcaggctcagcagtccggtgtcgtgacc
aacgcacaccggatcaacgccgggcagcacccggtcaccgacgggatgaaggacttcttc
ctcttcgtggaggacgatacggaagaggcggggcggctcaccgtggacgtggccgcccgt
cggattccggccaagttcgggctcgatccacgccgggacatccaggttctggcgcccatg
caccgggggccggccggggccggggcgctgaacgggctgctccagcaggccatcaccccc
ggccggcccgatgtgccggagaagcggttcggcggacgggtcttccgggtcggcgacaag
gtcacccagattcgcaacaattacgagaaagggaagaacggagtcttcaacggcaccgtg
ggcgtcgtcacctcgctcgacccggtcgaccagcgcctgacggtgctgacggacgaggac
gaggaggttccgtacgaattcgatgaactggacgaactggcacatgcgtacgcggtgacc
atccaccgctcccaggggagtgaatatcccgccgtggtgattccggtcaccaccggggca
tggatgatgctccagcggaacctcctctatacggcggtcacccgggccaagcggctggtt
gtcctcgtcggttcgcgcaaggcgatcgggcaggccgtgcgcacggtgtcggccggacgg
cggtgcacggccctcgacttcaggctcagcacgaaaaatgatcgatcaaatgagtcatga
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