Streptomyces fodineus: BFF78_30860
Help
Entry
BFF78_30860 CDS
T05140
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
spun
Streptomyces fodineus
Pathway
spun03030
DNA replication
spun03430
Mismatch repair
spun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BFF78_30860
03430 Mismatch repair
BFF78_30860
03440 Homologous recombination
BFF78_30860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spun03032
]
BFF78_30860
03400 DNA repair and recombination proteins [BR:
spun03400
]
BFF78_30860
Enzymes [BR:
spun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BFF78_30860
DNA replication proteins [BR:
spun03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BFF78_30860
DNA repair and recombination proteins [BR:
spun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BFF78_30860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AOR34870
UniProt:
A0A1D7YH56
LinkDB
All DBs
Position
7175131..7178670
Genome browser
AA seq
1179 aa
AA seq
DB search
MSKPPFTHLHVHTQYSLLDGAARLKDMFNACNEMGMTHIAMSDHGNLHGAYDFFHSAKKA
GVTPIIGIEAYVAPESRRNKRKILWGQPHQKRDDVSGSGGYTHKTMWAVNKTGLHNLFRL
SSDAYAEGWLQKWPRMDKETIAQWSEGIVASTGCPSGEVQTRLRLGHFDEALKAAADYQD
IFGKDRYFLELMDHGIDIERRVRDGLLEIGKKLGIPPLVTNDSHYTYAHEAGAHDALLCI
QTGKNLSDPDRFKFDGTGYYLKSTDEMYAIDSSDAWQEGCANTLLVAEMVDTDGMFEKRD
LMPKFDIPEGYTEVTWFKEEVRRGMERRFPGGIPEDRQKQADYEMDVIISMGFPGYFLVV
ADFIMWAKNNGIAVGPGRGSAAGSIVAYAMGITDLDPIPHGLIFERFLNPERISMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGTIKAKNAIKDSARVLGYPYAMGDRITKAMP
ADVLGKGIPLSGITDPSHPRYSEAGEVRGMYENEPDVKKVIDTARGVEGLVRQMGVHAAG
VIMSSETITEHVPVWVRHTDGVTITQWDYPSCESLGLLKMDFLGLRNLTIMDDAVKMVKA
NKGRDIDLLSLPLDDPKTFELLQRGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVSALY
RPGPMGMNSHTNYALRKNGQQEITPIHKELEEPLKEVLDVTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPEELAKNFVLFQEGARKKGFSDEAIQALWDVLVPFAGYAFNKA
HSAAYGLVSYWTAYLKANYPAEYMAALLTSVKDDKDKSAIYLNECRRMGIRVLPPNVNES
EANFAAQGDDVILFGLSAVRNVGTNVVESIIKCRKAKGKYASFPDYLDKVDAVVCNKRTT
ESLIKAGAFDEMGHTRKGLTAQYEPMIDNVVAVKRKEAEGQFDLFGGMGEETSSEPGFGL
DVQFTEEEWDKTYLLAQEREMLGLYVSDHPLFGLEHVLSDKADAGIAQLTGGEHADGAVV
TIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDAVVFVKGRL
DKREDVPRLVAMELMVPDLSNAGTNAPVILTIPATRVTPPMVSRLGEILSHHKGDSEVRI
KLQGPRKTTVLRLDRHRVKPDPALFGDLKVLLGPSCLAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaagccgcccttcacgcacctgcacgtccacacccagtactcgctgctggacggt
gccgcgcggctcaaggacatgttcaacgcctgcaatgagatgggcatgacgcacatcgcc
atgtccgaccacggcaacctgcacggggcgtacgacttcttccactccgcgaagaaggcc
ggggtcaccccgatcatcgggatcgaggcgtacgtcgcccccgagtcccggcgcaacaag
cgcaagatcctctggggccagccgcaccagaagcgggacgacgtctccggctccggtggt
tacacccacaagacgatgtgggcggtgaacaagaccggcctgcacaacctcttccgcctc
tcctccgacgcctacgccgagggctggctgcagaagtggccccggatggacaaggagacc
atcgcccagtggtccgagggcatcgtcgcctccaccggctgcccctcgggcgaggtgcag
acccgcctgcgcctcggtcacttcgacgaggccctgaaggccgccgccgactaccaggac
atcttcggcaaggaccggtacttcctggagctgatggaccacggcatcgacatcgagcgc
cgggtccgtgacggcctgctggagatcggcaagaagctcggcatcccgcccctggtcacc
aacgactcgcactacacctacgcgcacgaggccggggcgcacgacgccctgctgtgcatc
cagacgggcaagaacctctccgaccccgaccgcttcaagttcgacggcaccggctactac
ctgaagtccacggacgagatgtacgccatcgactcctcggacgcctggcaggagggctgc
gccaacacgctcctcgtcgccgagatggtcgacacggacggcatgttcgaaaagcgcgac
ctcatgcccaagttcgacatccccgagggctacaccgaggtcacctggttcaaggaggaa
gtgcgccgcggcatggagcgccgcttccccggcggcatccccgaggaccgccagaagcag
gccgactacgagatggacgtcatcatctcgatgggcttccccggctacttcctcgtggtc
gccgacttcatcatgtgggccaagaacaacggcatcgcggtcggccccggccgaggctcc
gcggccggctcgatcgtcgcctacgccatgggcatcaccgacctcgacccgatcccgcac
ggcctgatcttcgagcggttcctcaaccccgagcgcatctcgatgcccgatgtcgacatc
gacttcgacgagcggcggcgcgtcgaggtgatccggtacgtgaccgagaagtacggcgcc
gacaaggtcgccatgatcggcacgtacggcaccatcaaggccaagaacgcgatcaaggac
tccgcgcgcgtgctgggctacccgtacgcgatgggcgaccgcatcaccaaggccatgccc
gccgacgtcctcggcaagggcatcccgctgtccggcatcacggaccccagccacccccgg
tactcggaggcgggcgaggtccgtgggatgtacgagaacgaaccggacgtgaagaaggtc
atcgacaccgcacgcggtgtggagggcctggtccggcagatgggcgtgcacgccgccggc
gtgatcatgtccagcgagaccatcaccgagcacgtcccggtgtgggtgaggcacaccgat
ggcgtgaccatcacccagtgggactacccgagttgtgagtcgctcggcctgctgaagatg
gacttcctgggcctgcgcaacctcacgatcatggacgacgcggtcaagatggtgaaggcc
aacaagggccgtgacatcgacctgctgtcgctcccgctggacgaccccaagaccttcgag
ctgctccagcgcggcgacaccctcggcgtcttccagttcgacggcggccccatgcggtcc
ctgctccggctgatgaagcccgacaacttcgaagacatctccgccgtgtcggccctgtac
cgcccgggcccgatgggcatgaactcccacacgaactacgcgctgcgcaagaacgggcag
caggagatcacgccgatccacaaggaactcgaagagcccctcaaggaggtcctggacgtc
acctacggcctgatcgtctaccaggagcaggtgcagaaggccgcccagatcatcgcgggc
tactcgctcggcgaggccgacatcctccgccgcgtcatgggcaagaagaagcccgaggaa
ctggcgaagaacttcgtcctcttccaggagggcgcccggaagaagggcttcagcgacgag
gccatccaggccctgtgggacgtgctggtcccgttcgccggctacgcgttcaacaaggcc
cactcggccgcctacggcctggtctcgtactggaccgcgtacctgaaggcgaactacccc
gccgagtacatggccgcgctcctgacctccgtcaaggacgacaaggacaagtcggcgatc
tacctcaacgagtgccgccgcatgggcatccgggtgctcccgccgaacgtcaacgagtcc
gaggcgaacttcgccgcccagggcgacgacgtgatcctcttcggcctctccgccgtccgc
aacgtcggcaccaacgtcgtcgagtcgatcatcaagtgccgcaaggccaaggggaagtac
gcctccttccccgactacctcgacaaggtcgacgcggtggtctgcaacaagcgcaccacg
gaatcgctgatcaaggccggcgccttcgacgagatgggccacacccgcaagggactcacc
gcgcagtacgagccgatgatcgacaacgtggtcgcggtcaagcgcaaggaggccgagggc
cagttcgacctcttcggcggcatgggtgaggagaccagcagcgagcccggcttcggactc
gacgtgcagttcaccgaagaggagtgggacaagacctatctgctcgcccaggagcgggag
atgctcggtctgtacgtctccgaccacccgctcttcggcctcgaacacgtgctgtccgac
aaggccgatgcgggcatcgcccagctcaccggaggcgagcacgcggacggcgcggtcgtc
accatcggcggcatcatctccggcctgcagcgcaagatgaccaagcagggcaacgcctgg
gcgatcgccaccgtcgaggacctcgccggctccatcgagtgcatgttcttccccgcgacc
taccagctggtgtcgacccaactcgtcgaggacgccgtggtgttcgtcaagggccgcctc
gacaagcgcgaggacgtgccccggctcgtcgccatggagctgatggtcccggacctgtcc
aacgcgggcaccaacgcgccggtgatcctcaccatcccggccaccagggtcaccccgccc
atggtcagccgcctcggcgagatcctcagccaccacaagggcgacagcgaggtccgcatc
aagctccagggcccgcgcaagaccaccgtgctgcgcctggaccggcaccgggtcaagccc
gacccggcgctcttcggtgacttgaaggtgctgctcggcccgtcctgtctggcgggctga
DBGET
integrated database retrieval system
