Streptomyces fodineus: BFF78_31175
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Entry
BFF78_31175 CDS
T05140
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
spun
Streptomyces fodineus
Pathway
spun03030
DNA replication
spun03410
Base excision repair
spun03420
Nucleotide excision repair
spun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BFF78_31175
03410 Base excision repair
BFF78_31175
03420 Nucleotide excision repair
BFF78_31175
03440 Homologous recombination
BFF78_31175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spun03032
]
BFF78_31175
03400 DNA repair and recombination proteins [BR:
spun03400
]
BFF78_31175
Enzymes [BR:
spun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BFF78_31175
DNA replication proteins [BR:
spun03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BFF78_31175
DNA repair and recombination proteins [BR:
spun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BFF78_31175
NER (nucleotide excision repair)
GGR (global genome repair) factors
BFF78_31175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
NYN_YacP
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AOR34923
UniProt:
A0A1D7YH50
LinkDB
All DBs
Position
7250220..7252946
Genome browser
AA seq
908 aa
AA seq
DB search
MAETASKKTDKTPGGTRPRLMLMDGHSLAYRAFFALPAENFTTATGQPTNAIYGFASMLA
NTLRDEEPTHFAVAFDVSRKTWRSERFTEYKANRSKTPDEFKGQVELIGELLDAMHAPRF
AVEGYEADDVIATLATQAEAEGFEVLIVTGDRDSFQLVTENTTVLYPTKGVSELTRFTPE
KVFEKYGLTPAQYPDFAALRGDPSDNLPGIPGVGEKTAAKWINQFGSFGELVERVDEVKG
KAGQNLRDHLESVKLNRVLTELERQVELPRPVTDLERAPYDRKAVAMVLDTLEIRNPSLR
ERLFAVDPGSEEAEATPVTVDGVEIDGKILRTGELAPWLAGHGAETLGVATVGTWALGTG
SVAEVALAAAGGAAAWFDPAELDEADENAFAAWLADAGRPKVFHNAKGAMRVFAEHGWSV
EGVSMDTALAAYLVKPGRRSFDLDALSLEYLHRELAPAAAADGQLAFGTDDGAEAEALMV
QARAVLDLGTAFETRLEEVGAADLLRDMELPTSALLARMERHGIAADRAHLEAMEQTFAG
AVQQAVKEAHAAAGHEFNLGSPKQLQEVLFGELALPKTKKTKTGYTTDADALAWLATQTD
NELPVIMLRHREQAKLRVTVEGLIKTIAGDGRIHTTFNQTVAATGRLSSTDPNLQNIPVR
TDEGRAIRRGFVVGEGFESLMTADYSQIELRVMAHLSEDEGLIRAFTSGEDLHTTAASQV
FGVEPAAVDAEMRRKIKAMSYGLAYGLSAFGLSQQLNIEAAEARALMDAYFERFGGVRDY
LRRAVDEARATGYTATLFGRRRYLPDLNSDNRQRREAAERMALNAPIQGTAADIVKIAML
KVDSALRAADLKSRMLLQVHDEIVLEIAPGERAAAERIVRHEMSTAVQLRAPLDVSVGAG
PDWESAAH
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
gtggcagagacagcatcgaagaagaccgacaagacccccggcggtacccgcccccggctg
atgctcatggacgggcactcactggcctaccgcgcgttcttcgcgctgcccgcggagaac
ttcacgaccgcgaccggccagccgacgaacgcgatctacggtttcgcgtcgatgctggcc
aacaccctgcgtgacgaggagcccacgcacttcgccgtggccttcgacgtctcgcgcaag
acctggcgctccgagcgcttcaccgagtacaaggccaaccgctccaagacccccgacgag
ttcaagggccaggtcgagctgatcggcgagctcctcgacgcgatgcacgccccccgcttc
gccgtcgaggggtacgaggcggacgacgtcatcgccaccctcgccacccaggccgaggcc
gagggcttcgaggtgctgatcgtcaccggcgaccgcgactccttccagctggtcaccgag
aacaccaccgtgctctacccgaccaagggcgtctcggagctgacccggttcaccccggag
aaggttttcgagaagtacggattgacccccgcccagtacccggacttcgcggccctgcgc
ggcgacccgtccgacaacctccccggcatccccggcgtcggcgagaagaccgccgcgaag
tggatcaaccagttcggctcgttcggggaactggtcgagcgcgtcgacgaggtcaagggc
aaggccgggcagaacctccgcgaccacctggagtccgtcaagctcaaccgcgtcctcacc
gagctggagcgccaggtcgagctgccgaggccggtcaccgacctggagcgggccccgtac
gaccgcaaggccgtcgcgatggtcctggacaccctggagatccgcaacccgtccctgcgc
gagcgcctcttcgccgtcgaccccggctccgaggaggccgaggccaccccggtcacggtg
gacggcgtggagatcgacggcaagatcctgcgcaccggcgagctggccccctggctcgcc
gggcacggcgccgagaccctgggcgtcgccaccgtcggcacctgggcgctgggcaccggc
tcggtcgccgaggtcgccctggccgcggccgggggagcggccgcctggttcgacccggcc
gagctggacgaggccgacgagaacgcgttcgcggcctggctggcggatgccggccgcccc
aaggtgttccacaacgccaagggcgccatgcgcgtcttcgccgagcacggctggtccgtc
gagggcgtgagcatggacaccgcgctcgccgcctacctggtcaagccgggccgccgctcc
ttcgacctggacgcgctgtccctggagtacctgcaccgcgagctggcgcccgccgccgcg
gccgacggccagctggccttcggcaccgacgacggcgccgaggccgaggccctgatggtc
caggcccgcgcggtcctcgacctcggtacggccttcgagacgcgcctcgaggaggtcggc
gcggccgacctcctgcgcgacatggagctgcccacctccgccctgctcgcccgcatggag
cgccacggcatcgcggccgaccgcgcgcacctcgaagcgatggagcagaccttcgcgggc
gcggtgcagcaggccgtgaaggaggcccacgcggcggccggccacgagttcaacctgggc
tcacccaagcagctccaggaggtcctcttcggcgagctcgccctgccgaagaccaagaag
accaagaccggctacaccaccgacgccgacgccctggcctggctcgccacccagaccgac
aacgaactcccggtgatcatgctccgccaccgcgagcaggcgaagcttcgggtcacggtc
gagggcctgatcaagacgatcgcgggcgacggccgtatccacaccacgttcaaccagacg
gtcgccgccaccggccggctgtcctccacggacccgaacctgcagaacatcccggtccgc
acggacgagggccgggcgatccgccgcggtttcgtggtcggtgagggcttcgagtccctg
atgaccgccgactacagccagatcgagctgcgcgtgatggcccacctgtccgaggacgag
ggcctgatccgggcgttcacctccggcgaggacctgcacaccacggccgcctcccaggtg
ttcggcgtcgagcccgccgcggtggacgcggagatgcgccgcaagatcaaggcgatgtcg
tacggcctggcctacggcctctccgccttcggcctgtcccagcagctgaacatcgaggcg
gcggaggcgcgcgccctgatggacgcgtacttcgagcgcttcggcggtgtccgggactat
ctgcgccgggcggtcgacgaggcgcgggccacgggctacacggcgacgctcttcgggcgc
cggcgttacctccccgacctcaacagcgacaaccgccagcgccgcgaggcggccgagcgc
atggccctcaacgcgcccatccagggcacggcggcggacatcgtcaagatcgccatgctc
aaggtggacagcgccctgcgggcggcggacctgaagtcccgcatgctcttgcaggtccac
gacgaaatcgtcctggagatcgcccccggcgagcgagcggccgcggagcggatcgtccgc
cacgaaatgtccaccgccgtccagctccgcgcccccctggacgtctcggtgggcgccggt
ccggactgggagtcggcagcgcattag
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integrated database retrieval system
