Streptomyces fodineus: BFF78_39055
Help
Entry
BFF78_39055 CDS
T05140
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
spun
Streptomyces fodineus
Brite
KEGG Orthology (KO) [BR:
spun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spun03021
]
BFF78_39055
Transcription machinery [BR:
spun03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BFF78_39055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
KORA
HTH_23
HTH_38
HTH_Crp_2
MarR_2
MarR
Sigma70_ECF
HTH_27
IF2_N
GerE
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AOR36262
UniProt:
A0A1D7YL68
LinkDB
All DBs
Position
complement(9005648..9006535)
Genome browser
AA seq
295 aa
AA seq
DB search
MHTAVIRPDTEVAEWTEQDRTGVGSLPSIADPASVAPRDARELSRQFFRRLTELEEGTHA
YQYARNTLIEMNMSLVRFAAGRFRGRGDDMEDIVQTGMIGLIKAIDRFELAREVEFTSFA
LPYIVGEIKRFFRDTTWAVHVPRRLQELRVELAKAREELSSRLDRDPTVAELATLMNISA
DEVVEAQLASNGYNSASLDAAFTGDGPDGGEAVLADFIGVEEEGLRLVEDFHALAPLMAE
LSDRDRQIIHLRFVEEATQAEIGERLGCSQMHVSRLIKRIIARLRQGMLGELDCA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccgccgtgatccggccggacacagaggtcgccgagtggaccgagcaggacagg
acgggcgtgggatccctgcccagtatcgcggacccggcgtccgtcgcaccacgtgacgcg
cgggagctgtcccgccagttcttccgccggctgaccgagctggaggagggcacgcacgcg
taccagtacgcgcgcaacaccctcatcgagatgaacatgtcgctggtgcggttcgccgcc
ggacggttccgtggccgcggcgacgacatggaggacatcgtccagaccggcatgatcggc
ctgatcaaggccatcgaccggttcgagctggcccgcgaggtggagttcacctccttcgcg
ctgccgtacatcgtcggcgagatcaaacggttcttccgtgacaccacctgggcggtgcac
gtcccgcgccggctccaggagctgcgggtggagctggccaaggcccgcgaggagctgtcc
agccggctggaccgggacccgacggtggccgagctggcgacgctgatgaacatctccgcg
gacgaggtcgtcgaggcccagctcgcctcgaacgggtacaactccgcctccctcgacgcc
gcgttcaccggtgacggcccggacggcggcgaggcggtactcgccgacttcatcggcgtg
gaggaggaagggctgcggctcgtcgaggacttccacgcgctggcaccgctgatggccgaa
ctcagcgaccgggaccggcagatcatccatctgcggttcgtcgaggaagccactcaggcg
gagatcggggaacggctcggctgctcccagatgcatgtgtcccggctgatcaagcggatc
atcgcccggctgcgccaggggatgctcggcgagctcgactgcgcctga
DBGET
integrated database retrieval system
