Streptomyces fodineus: BFF78_39415
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Entry
BFF78_39415 CDS
T05140
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
spun
Streptomyces fodineus
Brite
KEGG Orthology (KO) [BR:
spun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spun03021
]
BFF78_39415
Transcription machinery [BR:
spun03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BFF78_39415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_23
KORA
HTH_Crp_2
DUF7343
HTH_3
MarR_2
HTH_24
MarR
Sigma70_ECF
YdaS_toxin
DUF6757
GerE
Motif
Other DBs
NCBI-ProteinID:
AOR36325
UniProt:
A0A1D7YL57
LinkDB
All DBs
Position
9082904..9083755
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AA seq
283 aa
AA seq
DB search
MLTDTSTSRTGTPGTHSAAAPARRPHDDAPDTAELFARLAGLDDGPERNAVRDDLVAAWL
PMAHRIAGRFRDRGESVEDLRQVAALGLVKAIDRFDPSRGAFESYAVPTITGEVKRHFRD
RMWALRVPRRVQELRNRVRVARRELTQHPGSPEPTLAAMAAHTGLTEEEVGAGVEALESF
STLSLDAELSAGDDGYSLADTLGAADSSYDVVVDREAAKEGLRRLPERERAILYMRFFED
MTQSRIADRLGISQMHVSRLISRSCARVRAEAMGRRVCGGGPA
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccgacacgtcgacgagccgtaccggcacgcccggcacacactccgccgccgca
ccggcgcggcggcctcatgacgacgcccccgacaccgccgagctgttcgcccggctggcg
ggactggacgacggccccgagcggaacgccgtacgcgacgacctcgtcgccgcctggctg
cccatggcccaccggatcgccggccgcttccgcgaccgcggcgagtccgtcgaggacctg
cggcaggtggccgcgctgggcctggtgaaggccatcgaccggttcgacccgtcccgcggg
gccttcgagagctacgccgtgccgaccatcaccggtgaggtcaagcggcacttccgggac
cggatgtgggccctgcgggtgccgcgccgggtccaggagctgcgcaaccgggtgcgcgtg
gcccgccgcgaactcacccagcaccccggcagccccgaacccaccctcgccgccatggcc
gcccacaccggcctcaccgaggaggaggtcggcgcgggcgtggaggccctggagagcttc
agcaccctgtccctggacgccgaactgtccgccggagacgacggctacagcctcgccgac
accctcggcgcggccgactcctcctacgacgtcgtcgtcgaccgcgaggccgccaaggag
gggctgcgccggctgcccgagcgggagcgggccatcctctacatgcgcttcttcgaggac
atgacccagagccgtatcgccgaccggctgggcatctcccagatgcacgtgtcccggctg
atcagccgcagctgcgcccgcgtccgtgccgaggccatggggcggcgcgtgtgcgggggc
ggaccggcatga
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