Streptomyces fodineus: BFF78_39495
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Entry
BFF78_39495 CDS
T05140
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
spun
Streptomyces fodineus
Brite
KEGG Orthology (KO) [BR:
spun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spun03021
]
BFF78_39495
Transcription machinery [BR:
spun03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BFF78_39495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
DUF7343
HTH_3
HTH_Crp_2
MarR_2
Sigma70_ECF
HTH_31
HTH_28
GerE
MarR
HTH_24
HTH_37
Motif
Other DBs
NCBI-ProteinID:
AOR36339
UniProt:
A0A1D7YLT7
LinkDB
All DBs
Position
complement(9103893..9104684)
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AA seq
263 aa
AA seq
DB search
MRVTGSANTHPHDDAPDTVESFERLAKLPDGPARRALRDELVRLWLPMAERIAVRFRGRG
EALEDLYQVAALGLVKAVDHYDPERGRAFEAYAVPTITGEIKRHFRDHMWTLHVPRRVQD
LRNRVRSATKELAQSTSGRPPTVAEIAAYARLTEDEVRTGMEALECFSALSLDAEVAGTD
GYALGDSLGGPDPGYDLVLDRVAVTPCLEALPERERIILYLRFFRGMTQSRIAEQLGISQ
MHVSRLLSSCFDRLREEVLAEAR
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtcaccggcagcgccaacacccaccctcacgacgacgcccccgatacggtcgag
tccttcgagcggctggcgaagctgcccgacggccccgcgcggcgggcactgcgtgacgaa
ctggtccggctgtggctgcccatggccgagcggatcgccgtgcggtttcgcggccgcggg
gaggccctggaggacctgtaccaggtggccgccctcggtctggtgaaggccgtcgaccac
tacgaccccgagcggggccgcgccttcgaggcgtacgccgtacccaccatcaccggtgag
atcaagcggcacttccgcgaccacatgtggaccctgcacgtgccgcgccgggtgcaggac
ctgcgcaaccgggtccgctccgccacgaaggaactggcccagagcacctcgggccgcccg
cccaccgtcgcggagatcgccgcctacgcgcggctcaccgaggacgaggtgcgtaccggc
atggaggcactggagtgcttctccgcgctgtccctggacgccgaggtcgccggcaccgac
ggctacgccctcggggactccctcggcggacccgaccccggatacgacctcgtgctcgac
cgggtcgccgtcacgccctgtctcgaggcactgccggaacgcgagcgcatcattctctat
ctgcggttcttccgcggcatgacccagagccggatcgccgagcagctcggcatctcccag
atgcacgtctcccgcctgctcagcagctgtttcgaccggctgcgcgaggaagtgctggcc
gaggcccgctga
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