Sphingopyxis sp. USTB-05: KEC45_04565
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Entry
KEC45_04565 CDS
T10625
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
spus Sphingopyxis sp. USTB-05
Pathway
spus03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KEC45_04565 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spus03400
]
KEC45_04565 (uvrB)
DNA repair and recombination proteins [BR:
spus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KEC45_04565 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KEC45_04565 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
UB2H
DUF87
Microtub_bd
AAA_16
DUF2963
FATC
AAA_22
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
USI78184
LinkDB
All DBs
Position
complement(1034742..1036928)
Genome browser
AA seq
728 aa
AA seq
DB search
MAIQIRTSLDEIDTAEGYVPHRPARPDKVEGGKRFELVSDYEPAGDQPTAIKELVSTALD
GERDQVLLGVTGSGKTFTMAKVIDELQRPALILAPNKILAAQLYGEFKSFFPNNAVEYFV
SYYDYYQPEAYVPRSDTYIEKESSVNEAIDRMRHSATRALLERDDVIIVASVSCLYGIGS
VETYSAMIFDLKKGQVADNREIIRKLVALQYKRNDQAFARGNFRVRGDSLEIFPSHYEDM
AWRVSFFGDEIEEITEFDPLTGKKIANLNYVRVYANSHYVTPGPTLKQASEAIRHELAER
LKELEAEGRLLEAQRLEQRTNFDLEMIAATGSCAGIENYSRFLTGRLPGEPPPTLFEYLP
DNALLFVDESHQTIPQIGAMSKGDHRRKITLAEYGFRLPSCIDNRPLRFAEWDMMRPQTV
SVSATPGTWEMDRTQGVFAEQVIRPTGLIDPPVFIKPVEEQVDDLIAEAKATAAAGYRTL
VTTLTKRMAEDLTEFLHEAGLKVRYMHSDVETLERIEIIRDLRLGVFDVLVGINLLREGL
DIPECGLVAILDADKEGFLRSETSLVQTIGRAARNVDGRVILYADRITGSMERAMRETDR
RREKQEAYNAEHGITPTTIKRNIGDIIAHVASKDQVTIDIGDDKPAHMVGHNLRAYIQEL
EKKMRDAAADLEFEEAGRLRDEIRKLEADELGLPADEQVAPRVGRSNEGKPGTRKGRFGK
QSKTKWGR
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggcaattcagattcgtacatcgctcgatgaaatcgatacggccgagggttatgtcccg
caccgtccggcacgccccgacaaggtcgaaggcggcaaacgattcgagttagttagcgac
tatgagcccgccggcgaccaaccgacggcgatcaaggaactggtgtcgacggcgctcgac
ggggagcgcgatcaggtactgctcggcgtcaccggttcgggcaagaccttcaccatggcg
aaagtcatcgacgagttgcagcgcccggcgctgatcctcgcgccgaacaagatcctggcg
gcgcagctctatggtgagttcaagagcttctttccgaacaatgcggtcgaatatttcgtc
agctattacgactattaccagccagaggcctatgtgccgcggtccgacacctatatcgag
aaggagtcgagcgtaaacgaggcgatcgaccgcatgcgccactcggcgacgcgtgcgttg
ctcgaacgcgacgacgtcatcatcgtcgcctcggtatcgtgcctctatggcatcggctcg
gtcgaaacctattcggcaatgatcttcgatttgaagaagggtcaggtcgccgataaccgc
gaaatcattcgcaagcttgtcgcgctgcaatataaacgcaacgatcaggcattcgcgcgc
ggcaattttcgcgtgcgcggcgacagcctcgaaatcttcccctcgcactatgaggacatg
gcgtggcgcgtcagtttcttcggcgacgagatcgaggaaatcaccgaattcgacccgctg
acgggcaagaagatcgcaaatctcaactatgtccgcgtttatgcgaacagccactatgta
acccccggcccgacgctgaagcaggcgtcggaggcgatccgccacgagcttgctgagcgg
ctaaaggaacttgaagccgaaggacgactgctcgaagcccaaaggcttgaacagcgcacc
aatttcgacctggagatgattgccgcgaccggtagctgcgcggggatcgagaattacagc
cgtttcctgaccggccgcctgcccggcgagccgccgccgaccctgttcgaatatctgccc
gacaacgccctgctcttcgtcgacgagagccaccagacgatcccacagatcggcgcgatg
tcgaagggcgaccatcgccgcaagatcaccctcgccgaatatggtttccgcctgccgagc
tgcatcgacaatcgtccgctgcgctttgccgaatgggacatgatgcggccgcagacagtg
agcgtatcggcgacgcccgggacgtgggagatggaccgtacgcagggcgtcttcgccgaa
caggtgatccgccccaccggcctgatcgacccgccagtgtttatcaagccggtcgaggag
caggttgacgacctgatcgccgaggcaaaggcgaccgcggcggcgggataccgcacgctc
gtcacgacactgacgaagcgcatggccgaggatcttaccgaattccttcacgaagcgggg
ctcaaggtccgctacatgcactcggacgtcgagacgctcgagcgtatcgagatcatccgc
gacctgcggctcggggtgttcgacgtgctggtcgggatcaacctgctgcgcgagggcctc
gacattcccgaatgcgggctcgtggcgatcctcgacgccgacaaggaaggctttttgcgc
agcgaaacctcgctcgtccagaccatcggccgcgcggcgcgcaatgtcgacggccgcgtc
atcctctacgccgaccgcatcaccggcagcatggaacgcgcgatgcgcgagaccgaccgg
cgccgcgaaaagcaggaagcgtataacgcggagcacggcatcaccccgacgacgatcaag
cgcaacatcggcgacatcatcgcgcatgtcgcgtcgaaggatcaggtgacgatcgacatc
ggcgacgacaagcccgcgcacatggtcggccataatctgcgcgcgtacatccaggagctc
gaaaagaagatgcgcgacgccgccgccgacctggaattcgaagaagcgggccgactgcgc
gacgaaatccgcaagctcgaagccgatgaactcggcctgcccgcggacgaacaagtcgcg
ccgcgcgtcgggcgctcgaacgagggcaagccggggacacgcaaggggcgttttgggaag
cagagcaagaccaaatgggggcggtga
DBGET
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