Sphingopyxis sp. USTB-05: KEC45_05480
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Entry
KEC45_05480 CDS
T10625
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
spus Sphingopyxis sp. USTB-05
Pathway
spus03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KEC45_05480 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spus03400
]
KEC45_05480 (recF)
DNA repair and recombination proteins [BR:
spus03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KEC45_05480 (recF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_15
AAA_29
ABC_tran
AAA_27
AAA_30
Motif
Other DBs
NCBI-ProteinID:
USI78357
LinkDB
All DBs
Position
1255064..1256173
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AA seq
369 aa
AA seq
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MTLTRLSLTDFRNHAGADIAAAAGLVALHGDNGAGKTNILEAISLLAPGRGLRRAALSDM
VRDGASGGFAVFAEVQAGADLAPVALGTGIEAAQPGRRIVRINGATAAATALGDWLAVLW
LTPAMDRLFVETAGNRRRFLDRLVLALDPRHAQHSNRYDAALRARGKLLADLGSADQQWL
TSLEAQLAEHGAAMDRARQHMLAGLAAELAEQPDAPFARPLLTLVDSDGAVREGPHDVEA
LKALFASRRRIDAAAGRATAGPHRDDLSAVHAVTGRAAARCSTGEQKAMLLSLVLAHSDC
VARLRGQRPVLLLDEVAAHLDPLRRGALYERLAGQGGQAWLTGTEAALFDDMPGPVTRFR
IAGGRIAAG
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgacccgcctttcgctgaccgattttcgcaatcatgccggcgcggacatcgcg
gcggctgcggggctcgtcgcgctgcacggcgacaatggcgcgggcaaaaccaatatattg
gaggcgatctcgctgctcgcgcccgggcgtgggctgcgccgtgcggccttgtcggatatg
gtgcgcgacggagcgagcggcggctttgcggttttcgccgaagttcaggccggtgccgac
ctggcgccggtggcgctgggaacggggatcgaggccgcgcagcccggccgacggatcgtg
cgcatcaacggcgcgaccgcagcagcgaccgcgctcggcgactggctggcggtactgtgg
ctgacccccgcgatggaccgactatttgtcgagactgcgggcaaccggcggcgcttcctc
gatcgccttgtgctcgcgctcgacccgcggcacgcgcagcacagcaatcgttatgatgcg
gcgctgcgcgcacgcgggaaactgctcgccgaccttggtagcgccgatcagcaatggctg
acgagcctggaggcccagcttgccgagcatggcgcggcgatggatagggctcgtcagcat
atgttggccgggctggcggcggaactggcggagcagcccgatgcgccgttcgctcggcca
ttgttgacgctggtcgacagcgacggggcggtgcgcgagggcccgcacgacgtcgaggcg
ctgaaggcgctgttcgcatcgcggcgacggatcgacgccgcggcgggacgcgcgaccgcg
gggccgcaccgcgacgatctgtcggctgtccatgcggtgacgggccgcgcggcggcgcga
tgttcgaccggtgagcagaaagccatgctgctctcgctcgtcctcgcgcacagcgactgc
gtcgcgcggttgcgcggacagcgtccggtgctgcttctcgacgaagtggcggcgcacctg
gacccgctgcggcgcggggcgctttatgagcggctggcggggcagggcgggcaggcctgg
ctgacgggaaccgaggcggcgctgttcgacgacatgccggggccggtcacgcggttccgg
attgcgggcgggcgcatcgctgcgggctga
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