Sphingopyxis sp. USTB-05: KEC45_07440
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Entry
KEC45_07440 CDS
T10625
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
spus Sphingopyxis sp. USTB-05
Pathway
spus00521
Streptomycin biosynthesis
spus00523
Polyketide sugar unit biosynthesis
spus00525
Acarbose and validamycin biosynthesis
spus00541
Biosynthesis of various nucleotide sugars
spus01100
Metabolic pathways
spus01110
Biosynthesis of secondary metabolites
spus01250
Biosynthesis of nucleotide sugars
Module
spus_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
spus00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
KEC45_07440 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
KEC45_07440 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
KEC45_07440 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
KEC45_07440 (rfbB)
00525 Acarbose and validamycin biosynthesis
KEC45_07440 (rfbB)
Enzymes [BR:
spus01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
KEC45_07440 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
adh_short_C2
NmrA
Motif
Other DBs
NCBI-ProteinID:
USI78717
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Position
complement(1666294..1667355)
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AA seq
353 aa
AA seq
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MKILVTGGAGFIGSAVVRLAISRGYEVVNLDALTYAACLENLATVADSPLYSFEHADIRD
RAALTEIFTRHRPDAVMHLAAESHVDRSIDGPDDFIQTNIVGTFNILEAARKYWSDAGKP
DKFRFHHISTDEVFGSLSADPADRFHEETPYSPRSPYSASKASSDHLVRAWHETYGLPVV
LTNCSNNYGPNQFPEKLIPVVILNAVSECPIPIYGNGSNVRDWLFVLDHAEALLRVVEAG
RVGRSYNIGGDNERSNLDIVQAICAILDDIRPRANGKPYADLITYVADRPGHDARYAIDA
SRARDELGWRPSVTVEEGLRTTIGWYLDNESWWRPMLERQGLGKRLGTGRRAA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgaagatactcgtcacaggcggagcggggttcatcggttcagcagtggttcggctggcg
atatcgcgcggctacgaggtggtgaacctcgatgcgctaacctatgcggcatgcctcgaa
aatcttgcgacggtcgctgacagcccgctatatagtttcgagcatgcggacatccgtgat
cgcgcggcgctcaccgaaattttcacccgacatcgtccggatgcggtcatgcatctggca
gcggaatcgcatgtcgatcgttccatcgatggtccggacgatttcatccagacgaatatc
gtggggaccttcaatattctcgaggcggcccggaaatattggtcggatgcgggcaaaccc
gacaaattccgctttcatcacatcagcacggatgaagtctttggctcactgtcagcggat
cccgccgaccgtttccatgaagaaaccccctatagtccgcgcagcccctattccgcgtcg
aaagccagttccgaccatttggtaagggcgtggcacgaaacctatggcttgccggtcgtt
ctcacaaattgctcgaacaactatggccccaatcagtttcccgaaaagctgatcccggtc
gtgatccttaacgccgtttcggagtgtccgatcccgatctacggcaatggatcgaacgtc
cgcgactggctgtttgttctcgatcacgccgaggctttgctccgggtggtcgaagcgggc
cgtgtcgggcgcagctataacatcggcggcgacaatgaacgttcgaatctggatatcgtc
caagccatatgcgcgatcctggacgatattcgcccgcgcgcgaacgggaagccctatgcc
gatctcattacctatgtcgccgaccgccccggtcacgacgcccgctatgcgatcgacgca
tcgcgggcgcgcgacgagcttggctggcgcccgtcagtcaccgtcgaagaagggctgagg
acaacgataggctggtatctcgacaatgagagctggtggcgtccgatgctcgaacgtcaa
ggcctgggtaaacgtctcggaaccgggcggagggcggcgtga
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