KEGG   Sphingopyxis sp. USTB-05: KEC45_08465
Entry
KEC45_08465       CDS       T10625                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K07712  two-component system, NtrC family, nitrogen regulation response regulator GlnG
Organism
spus  Sphingopyxis sp. USTB-05
Pathway
spus02020  Two-component system
Brite
KEGG Orthology (KO) [BR:spus00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    KEC45_08465
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:spus02022]
    KEC45_08465
Two-component system [BR:spus02022]
 NtrC family
  GlnL-GlnG (nitrogen regulation)
   KEC45_08465
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_5 AAA_16 HTH_30 AAA TIP49 Phage_NinH HTH_20 AAA_2 IstB_IS21 nSTAND3
Other DBs
NCBI-ProteinID: USI78908
LinkDB
Position
1873283..1874701
AA seq 472 aa
MSKGKTILLVEDDPAIAMIIRETLVGECAHFASVASLAERNAWLADNRPDLVITDVVLPD
GDGIDSLSRSAIDPTTPVIVLSAQNTLDTAVRATGIGSYDYLPKPFDLDELTASVRAALQ
RRAEPAAREAAVPADSHGLVGRAPAMQAVYRTIARLASNDLAVLILGESGTGKEVVARAI
HATGLRRSGPFVAINMAAIPRELIEAELFGHEKGAFTGAHSRNAGRFEQAAGGTLFLDEI
GDMPLEAQTRLLRVLQSNEYSTVGGNQALRADVRVIAATHRDMRTLVADGRFREDLFYRL
NVIPVTLPPLRDRRSDIAALVRHFVEVGRGSGLPDRQFAPAAMQWLERYDWPGNVRELGN
VVQRLAVLSRDIVVTVRDVETVLQDNGEGGGMVEPAALIARAVDDWTREKMADAAGDGHI
HEQLEAIVEAALFRRILRDVRGNQLEAARRLGINRNTLRKRLGQLDIDPAHP
NT seq 1419 nt   +upstreamnt  +downstreamnt
gtgagcaagggcaagacgatcctgttggtcgaggacgatcccgcgatcgcgatgatcatc
cgcgaaacgctcgtcggcgagtgcgcccatttcgcgtcggtcgcgagtctggccgaacgc
aatgcctggcttgcggataaccgccccgatctcgtcattaccgacgttgtgcttcccgat
ggcgacggcatcgattcattgtcgcgctccgcgatcgatcccacgacgccggtgatcgtg
ctgtcggcgcagaatacgctcgacacggcggtgcgcgccacggggatcggcagttacgat
tatcttcccaagcccttcgatctcgatgaactgaccgccagcgttcgtgccgcattgcag
cggcgagcagagcctgccgccagggaggccgcggtccccgccgacagccacggactggtc
ggccgagcgcccgcgatgcaggccgtataccgcacgatcgcgcgactcgcgtcgaacgat
ctcgcggtgctgatccttggggaatcgggtacgggcaaggaggtcgtcgcacgtgcgatt
cacgcgacgggcctccgccgcagcggccccttcgttgcgatcaacatggccgcgattccg
cgcgagctgatcgaggccgaattgttcgggcatgagaagggggcctttaccggcgcgcat
agtcgcaatgccgggcgtttcgagcaggccgcgggcggcacactgtttctcgacgaaatc
ggcgacatgccgctggaggcgcagacgcggctgctgcgggtgctccagagcaacgaatat
tcgaccgtcggcggcaatcaggcgctgcgcgccgacgtgcgcgtcatcgcggcgacccac
cgcgacatgcgcacgctcgtcgccgatggccggttccgcgaggaccttttctaccggctc
aacgtcattccggtgacgctgccgccgctgcgcgaccgacgcagcgacatcgccgcactg
gtgcgccattttgtcgaggtcggacgcggctctgggctacccgatcggcagtttgcgccc
gctgcgatgcaatggctcgaacgctatgactggccgggcaatgttcgcgaactcggtaac
gttgttcagcgactcgcggtcctgtcgcgcgacatcgtcgtgaccgtccgcgatgtcgaa
accgtcctgcaggataatggcgagggcggcggaatggtcgaacccgcggcgcttatcgcc
cgcgcggtcgacgattggacgcgcgagaagatggcggacgcggcgggcgacggacatatc
cacgaacagctcgaggcaattgtcgaagcggcgcttttccgtcggatattacgcgatgtt
cgcggcaatcagcttgaggcggcgcggcggctgggcatcaaccgcaacacgttgcgcaag
cgccttggacagctcgatatcgacccggcgcatccttga

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