KEGG   Sphingopyxis sp. USTB-05: KEC45_08475
Entry
KEC45_08475       CDS       T10625                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
spus  Sphingopyxis sp. USTB-05
Pathway
spus02020  Two-component system
Brite
KEGG Orthology (KO) [BR:spus00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    KEC45_08475
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:spus02022]
    KEC45_08475
Two-component system [BR:spus02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   KEC45_08475
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_5 AAA_16 TadZ_N nSTAND3 DUF8388
Other DBs
NCBI-ProteinID: USI78910
LinkDB
Position
1877076..1878455
AA seq 459 aa
MALDILIVDDERDICELVAGVMEDEGYEARTASDSDSALEAIRQRRPSLALIDVWLQGSR
LDGLGLVEAIKAFDPTLPIIVISGHGGLDTAVAAIRRGAFDFIEKPFEASRLLHLVARAT
ENERLKFEYEQLREKAGPSDELTGTSAAINNVRATLKRVAGTGSRVLITGAPGVGKEVAA
RVLHGWSGRQNAPFRVISSARMDPETVETELFGSEAEDGSIRVGLLEQAHGGTLFLDEVA
DMPLTTQGKILRVLTDQSFARVGGRTMIRVDVRIISGSARDLMTEIAENRFREDLYYRLN
VVPVHIPPLRERRDDIASLCDHYIRRYAADRRVPPPEISSEAMAALQAHEWPGNVRELRN
VIERVMILAPSDRLNRIDADMLPAELVRGGADILPNSESITAIPLKEARENFEREYLRIQ
INRFSGNISRTATFIGMERSALHRKLKLLGLTESSDGEG
NT seq 1380 nt   +upstreamnt  +downstreamnt
atggcgcttgatattttgatcgtcgacgacgaacgtgacatctgcgaactcgtcgccggc
gtcatggaggacgaaggttatgaggcgcgcaccgcctccgacagcgattccgcgctcgaa
gcgatccggcagcgacgcccgtcgctcgcgctgatcgacgtctggcttcagggctcgcgg
ctcgacggtctcgggctggtcgaggcgatcaaggcctttgacccgacgctgccgatcatt
gtcatttcggggcatggcgggctggataccgcggttgcagcaatccgccgcggcgcgttc
gatttcatcgaaaagccgttcgaggcatcgcgtctgctccacctcgtcgcgcgcgcgacc
gagaatgagcggctgaagttcgaatatgagcaattgcgtgaaaaggcaggcccctctgac
gaactgaccgggaccagtgcggcaatcaacaatgtccgtgcgacgctgaagcgcgtcgca
ggaaccgggagccgcgtgctgatcacaggcgcgccgggcgtcggcaaggaagttgcggcg
cgcgtgctgcacggatggagcggccggcagaatgcgcccttccgcgtcatttcctccgcg
cggatggatcccgaaacggtcgagaccgaattattcggttccgaggccgaggacggctcg
atccgcgtcggactgctcgaacaggcgcatggcgggaccttgttcctcgacgaagtcgcc
gatatgccgctgaccacgcagggcaagatcctgcgcgtcctgaccgatcagagcttcgcc
cgggtgggcggccggacaatgatccgcgtcgatgtccgcatcatttcaggttcggcgcgc
gacctgatgaccgaaatcgccgaaaaccggtttcgcgaagatctctattacaggctcaat
gtcgtacccgtgcatatcccgccgctgcgcgaacgccgcgacgatatcgccagcctttgc
gatcactatatccgccgctatgccgccgatcgtcgcgtcccaccgcccgaaatcagttcg
gaagcgatggcggcgctccaggcgcacgaatggccgggcaatgtccgcgaactgcgcaac
gtgatcgagcgtgtcatgatccttgcacccagcgaccggctgaatcgtatcgacgccgat
atgctgccagccgaactggtccgcggcggcgccgatatcctgcccaactcggaatcgatc
acggcaatcccgctgaaggaagcgcgcgagaatttcgaacgcgaatatctgcgcatccag
atcaaccgcttttcgggcaatatctcacgcaccgcgaccttcatcggaatggaacgttcc
gcactgcaccgcaaactgaaacttttaggccttaccgagagttcggacggcgagggatag

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