KEGG   Sphingopyxis sp. USTB-05: KEC45_08765
Entry
KEC45_08765       CDS       T10625                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
spus  Sphingopyxis sp. USTB-05
Brite
KEGG Orthology (KO) [BR:spus00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    KEC45_08765 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spus03019]
    KEC45_08765 (rnc)
   03009 Ribosome biogenesis [BR:spus03009]
    KEC45_08765 (rnc)
   03036 Chromosome and associated proteins [BR:spus03036]
    KEC45_08765 (rnc)
Enzymes [BR:spus01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     KEC45_08765 (rnc)
Messenger RNA biogenesis [BR:spus03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     KEC45_08765 (rnc)
Ribosome biogenesis [BR:spus03009]
 Eukaryotic type
  90S particles
   RNase
    KEC45_08765 (rnc)
 Prokaryotic type
  rRNA processing factors
   KEC45_08765 (rnc)
Chromosome and associated proteins [BR:spus03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     KEC45_08765 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM DSRM_2
Other DBs
NCBI-ProteinID: USI78963
LinkDB
Position
1940451..1941131
AA seq 226 aa
MNDPLDTGALASIIGDAPGDPALYDLALTHGSTGRADYQRLEFLGDRVLGLVIASELYTR
FPTASEGEMSSRLHVLAAGATCAAVARKLDLTALIRFGAQARNDGGRYSDNIAADAMEAL
IGALYLDKGADAARQFILTHWNEMIDGQQAAPKHPKAALQEWALARKRRPPEYEIVSREG
PDHAPRFRIAVSIGKLARAEAEGASKQAAEKAAAAALLAELEGMKL
NT seq 681 nt   +upstreamnt  +downstreamnt
ttgaacgatcccctcgacaccggggcgctcgccagcatcatcggcgacgctccgggcgat
ccggcgctctatgatctggcgctgacgcacggcagcaccgggcgcgccgactatcaacgg
ctcgagtttctgggcgaccgtgtcctggggctcgtgattgcgtctgaactctacacgcgc
ttccccaccgcaagcgaaggcgagatgtcgtcgcggctgcacgtgctcgcggcgggcgcg
acgtgcgctgcggtggcgcgcaagctcgatctgaccgcactgatccgcttcggcgcgcag
gcacgtaacgacggcgggcgatacagcgacaatattgctgccgacgcgatggaagccctg
atcggcgcactctatctcgacaaaggtgctgatgcggcgcggcagttcatcctgacccat
tggaacgaaatgatcgacgggcagcaggcggcgccgaaacatccgaaggcggcgcttcag
gaatgggcgctcgcacgcaaacgccgcccgcccgagtatgaaatcgtctcacgcgaaggc
cccgaccacgcgccgcgctttcgtatcgcggtgagcatcggcaagctcgcccgtgctgaa
gccgaaggtgcatcgaaacaagctgccgaaaaggcggcggcggcggcgttgctcgccgaa
ctcgaaggaatgaaattatga

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