Sphingopyxis sp. USTB-05: KEC45_10190
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Entry
KEC45_10190 CDS
T10625
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
spus Sphingopyxis sp. USTB-05
Brite
KEGG Orthology (KO) [BR:
spus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spus03032
]
KEC45_10190
03036 Chromosome and associated proteins [BR:
spus03036
]
KEC45_10190
03400 DNA repair and recombination proteins [BR:
spus03400
]
KEC45_10190
DNA replication proteins [BR:
spus03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KEC45_10190
Chromosome and associated proteins [BR:
spus03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
KEC45_10190
DNA repair and recombination proteins [BR:
spus03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
KEC45_10190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-DNA_bdg
Nup214_FG
Motif
Other DBs
NCBI-ProteinID:
USI79232
LinkDB
All DBs
Position
2228399..2228677
Genome browser
AA seq
92 aa
AA seq
DB search
MIRSELVQKIASENSDLRLEEVERIVDTFFDSIVDQLASGGRVELRGFGAFSTRSRESRV
GRNPRTGASVDVKAKSVPYFKPGKEMRERLNG
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgatccggtcagaactggttcagaagatcgcgagcgaaaacagcgatttgcggctagag
gaagtcgagcgcatcgttgacacattcttcgattccatcgtcgatcagctcgcctcgggc
gggcgtgtcgaactgcgtggcttcggcgccttctccacccgatcgcgcgagtcgcgcgtc
ggacgcaatccccgaacaggggcctccgtcgatgtgaaggcgaagagcgtgccctatttc
aaaccgggcaaggaaatgcgcgaacgcctgaacggctga
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