Sphingopyxis sp. USTB-05: KEC45_12720
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Entry
KEC45_12720 CDS
T10625
Symbol
gcvPA
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase subunit GcvPA
KO
K00282
glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:
1.4.4.2
]
Organism
spus Sphingopyxis sp. USTB-05
Pathway
spus00260
Glycine, serine and threonine metabolism
spus00630
Glyoxylate and dicarboxylate metabolism
spus00670
One carbon pool by folate
spus00785
Lipoic acid metabolism
spus01100
Metabolic pathways
spus01110
Biosynthesis of secondary metabolites
spus01200
Carbon metabolism
Module
spus_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
spus00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
KEC45_12720 (gcvPA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KEC45_12720 (gcvPA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
KEC45_12720 (gcvPA)
00670 One carbon pool by folate
KEC45_12720 (gcvPA)
Enzymes [BR:
spus01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
KEC45_12720 (gcvPA)
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GFIT
Motif
Pfam:
GDC-P
Aminotran_5
Cys_Met_Meta_PP
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
USI75636
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Position
complement(2743108..2744466)
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AA seq
452 aa
AA seq
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MRYLPLTSDDRAAMLASVGASSIDDLFVDVPAEARLDGPIAGLPNHASELAVERHMGALA
RRSRAAGEGPFFLGAGAYRHHVPASVDHLIQRGEFLTAYTPYQPEIAQGTLQMLFEFQSQ
VARLLGTDVANASMYDGSTACWEAIVMARRITKRAKALLSTGLHPHYRSVARTMAKYTGD
TLVDGDPSLEAGTDWAALASAIDKDTSCVVVQYPDILGRIDDMTKLAEACQAAGALLIAV
VTEPVALGLIKSPGEMGADIVVGEGQSLGVGLQFGGPYVGLFACKTKYVRQMPGRLCGET
VDANGKRGFVLTLSTREQHIRREKATSNICTNSGLCALAFSIHMTLLGEAGLRQLAAINH
GRAQAAAAELAKLPGVSVLNNSFFNEFTLLLPTAARPVIHKLAERDILGGVSLGRLYPDN
EGLENGLVVAVTETVTEADIAAFAAALKEVLA
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcgttatctccctctgacttccgatgatcgcgcggcgatgctcgccagcgttggcgcg
tcgtcgatcgacgatctgttcgtcgacgtccccgccgaagcgcgactggacggcccgatc
gccggcctgccgaaccatgcgagcgagcttgcggtcgaacgtcatatgggcgcgctcgca
cgccgcagccgcgccgcgggcgagggaccctttttcctcggcgccggcgcctatcgccat
catgtgccggcaagcgtcgatcatctgatccagcgcggcgagttcctgaccgcctacacg
ccctatcagcccgaaatcgcgcagggcacgctgcagatgctgttcgaattccagtcgcag
gtcgcgcggctgctcggcaccgacgttgccaatgcgtcgatgtacgacggctcgaccgcg
tgctgggaagcaatcgtcatggcgcgccgcatcaccaagcgcgccaaggccttgctctcg
accgggcttcacccgcattatcgcagcgttgcgcgcacgatggcgaaatataccggcgat
acgctcgtcgacggcgaccccagtctcgaggctgggaccgactgggcggcgctggcctcg
gcgatcgacaaggacacaagctgcgtcgtcgtccaatatcccgatatccttggccgcatc
gatgatatgacgaagctggccgaggcctgccaggcggcgggtgcgctgttgatcgcggtc
gtgaccgaacccgtcgcgctcggtctcatcaagtcgccgggcgaaatgggcgcggatatc
gtcgtgggtgagggccaatcgcttggtgtcgggctgcagttcggcggaccctatgtcggc
ttgttcgcgtgcaagaccaaatatgtccgccagatgccgggtcgcctgtgcggcgaaacc
gtcgacgccaatggcaagcgcggtttcgtgctgacgctctcgacgcgcgaacagcatatt
cgccgcgaaaaggcgacgagcaatatctgcaccaattcagggctctgtgcgctggccttc
agcatccatatgacgttgctcggtgaagcgggccttcgtcaactcgccgcgatcaatcac
ggccgcgcgcaggctgctgccgccgaactcgcgaagctgccgggcgtgtcggtgctgaac
aacagcttcttcaacgaattcacgctgctgcttcccaccgcggcacgcccggtgatccac
aagcttgcggagcgggatatcctcggcggcgtctcgctcggccgcctctatcccgacaat
gaaggccttgaaaacggcctcgtcgtcgccgtgaccgaaaccgtgaccgaggcggatatc
gccgccttcgccgctgccctgaaggaggtgctggcatga
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