Sphingopyxis sp. USTB-05: KEC45_13020
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Entry
KEC45_13020 CDS
T10625
Name
(GenBank) pyridoxal-dependent decarboxylase, exosortase A system-associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
spus Sphingopyxis sp. USTB-05
Pathway
spus00300
Lysine biosynthesis
spus00470
D-Amino acid metabolism
spus01100
Metabolic pathways
spus01110
Biosynthesis of secondary metabolites
spus01120
Microbial metabolism in diverse environments
spus01230
Biosynthesis of amino acids
Module
spus_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
spus00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KEC45_13020
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KEC45_13020
Enzymes [BR:
spus01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
KEC45_13020
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
USI75694
LinkDB
All DBs
Position
complement(2811689..2812918)
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AA seq
409 aa
AA seq
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MKPHGPIPPGFRADTSGMLLIGGDRAEALADVAGDTPLFAYDSAMLTARIAEWRAAMPGG
VQLHYAMKANPYAPVLAFMARLVDGFDVASGGELKAALASGMPAGDISFAGPGKRDRELE
ATITAGATLNLESVGEAERALSIAEHLGLTPSLAVRVNPDFDLKGSGMKMGGGAKPFGVD
AAEVPALVGRLINAGADWQGFHIFAGSQALDAAAIAETQAQTVALAARLANEIGETPPLV
NLGGGMGVPYFPGDKAVDVRAVGAALGETLAARDPVLAKSHFAMELGRWLVAEAGVYLTR
VVDRKVSHGETFLVTDGGLHHQLAASGNFGTVIRRNYPIAVAGAFGREPVETVSVVGCLC
TPLDRLGDQVALPRAEVGDIIAIFLAGAYGASASPASFLGQGPAREMLV
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgcacggtccgatcccgcccggcttccgtgccgacactagcggtatgttgctc
atcggcggcgaccgcgccgaggcgcttgcagacgtcgcgggcgacaccccgctgttcgcc
tatgacagcgcgatgctgaccgcgcgcatcgccgaatggcgcgccgcgatgcccggcggg
gtgcagcttcattatgcgatgaaggcgaacccctatgcgcctgtgctcgctttcatggcg
cggctggtcgacggtttcgacgtcgcctcaggcggcgaactcaaagccgcgctcgctagc
gggatgccggcgggcgacatcagttttgccggccccggcaagcgcgaccgcgaactcgaa
gcgacgatcactgccggagcgacgctcaatcttgaatccgttggcgaggccgaacgggca
ctgtcgatcgccgagcatcttggccttactcccagtcttgccgtgcgggtcaatcccgac
ttcgacctcaaagggtcgggcatgaagatgggtgggggcgccaagccctttggcgtcgat
gccgccgaagttccggcgctcgtcggacgcctgatcaatgccggtgccgactggcagggt
ttccatattttcgcaggatcgcaggcgcttgacgccgcggccatcgccgaaacacaggcg
cagaccgttgcactcgcagcgcggctcgcgaacgagatcggggagacaccgcccctcgtc
aatctcggcggcggcatgggcgtgccctattttcccggcgacaaggcggtcgatgtgcgg
gcggtcggggctgcgcttggcgagacgctggcggcgcgcgatccggtgctcgccaaaagc
catttcgcgatggaactgggccgctggctcgtcgccgaagcgggcgtctatctgacccgc
gtcgtcgatcggaaggtcagccatggcgaaaccttcctcgtcaccgacggtggcctccac
caccagcttgccgccagcggcaatttcggcacggtgatccgccgtaactatccgatcgcg
gtggcgggcgcctttggccgggagcctgtcgaaaccgtgtcggtcgttggctgcctctgc
accccgctcgaccgccttggcgatcaggtcgcgctaccgcgcgccgaggtcggcgacatc
atcgcgatcttccttgcgggcgcctatggggcgagcgcgagcccggcgagcttcctgggg
cagggaccggcgcgggaaatgctcgtgtga
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