Sphingopyxis sp. USTB-05: KEC45_13380
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Entry
KEC45_13380 CDS
T10625
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
spus Sphingopyxis sp. USTB-05
Pathway
spus00300
Lysine biosynthesis
spus00470
D-Amino acid metabolism
spus01100
Metabolic pathways
spus01110
Biosynthesis of secondary metabolites
spus01120
Microbial metabolism in diverse environments
spus01230
Biosynthesis of amino acids
Module
spus_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
spus00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KEC45_13380 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KEC45_13380 (lysA)
Enzymes [BR:
spus01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
KEC45_13380 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Lipase_GDSL_2
Motif
Other DBs
NCBI-ProteinID:
USI75759
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All DBs
Position
2885722..2887002
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AA seq
426 aa
AA seq
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MNSFPTRGGEIHAEAVSLETIAATVGTPAYVYSAEALRRSAQRFRAALAGVPRKQLMFAV
KANPSLAVLRILADQNYGADIVSGGELDCALAAGITANHIVFSGVGKTAPELIAGLDAGI
GRFNLELEREGQLLSALAAQRGKRAPTLLRINPDVDASTHAKITTGRCDSKFGVAINEAS
AMYDRLAALPGLDLHGLAVHIGSQITDLAPLEAAYRKIGELIRALRAKGHRVYHVDLGGG
LGVSYRPDQTEADVEAYGAMVAAVTRDWDATLLFEPGRLIAAQAGILLTRVLWVKPGSEH
PFVVVDAAMNDLARPALYDAWHEFAAVRPTGDRFVAHIVGPICETGDTFAKARAIDRVGE
GDLALFRSAGAYGAAMASTYNCRALVPEVLVDGNRHAVIAERTPAHAVRKQHLAPWMQGA
PSIRAA
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaacagctttcccacgcgtggcggcgagatacacgccgaggcagtgtcgctcgagaca
atcgccgcgaccgtcggcacgcccgcctatgtctattccgccgaggcgcttcggcgctcg
gcacagcgcttccgcgcagcgctcgcgggggtgccgcgcaagcagcttatgttcgcggta
aaggccaatccctcgctcgccgtgctccgcatcctcgccgatcagaattatggtgccgac
atcgtttccggcggcgagctcgattgcgcgctggccgccgggatcaccgcgaaccacatc
gtcttctcgggcgtcggcaagacggcgcccgaactcatcgccgggctcgatgccggtatc
ggccgcttcaacctcgaactcgagcgcgaggggcagttgctctcggcgctcgcagctcag
cgcggcaaacgcgcgcccaccctgctccgcatcaaccccgacgtcgacgcgagcacgcac
gcaaagatcacgacgggccgctgcgacagcaagttcggcgtcgccatcaacgaagcctcc
gcgatgtacgaccggcttgcggcgcttccgggcctagatcttcacgggcttgccgttcac
atcggaagccagatcaccgaccttgcgccgctggaggccgcctatcgcaagatcggtgag
ttgatccgcgcgctgcgggcaaagggccaccgcgtctatcatgtcgatctcggtggcggg
ctcggcgtatcataccggcccgatcagacggaggcggacgtcgaagcttatggcgcgatg
gtcgcggcggtcacgcgcgattgggacgcgaccctcctcttcgaacccggccgccttatc
gccgcgcaggccggcatcctccttacacgtgtcttgtgggtaaagccggggtcggagcat
ccattcgtggtggtcgacgccgcaatgaacgacctcgcccgtcccgcgctatatgacgca
tggcatgaatttgccgccgtccggcccacgggtgaccgcttcgtcgcccatatcgtcggc
ccgatctgcgagaccggcgacacttttgcaaaggcgcgggcgatcgaccgggtcggcgaa
ggcgacctcgcgctcttccgatcggccggggcgtatggcgcggcgatggcatcgacttat
aattgccgggcgctcgtccccgaggtgctggtcgacggcaaccgccatgcagtcattgcc
gaacgcacgccggcgcatgcggtacgaaagcagcacttggcgccgtggatgcagggcgcc
ccgtcgatccgcgccgcctga
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